Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 SNORD58A-201ENST00000383875 65 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 MIR516A2-201ENST00000384888 90 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 MIR516A1-201ENST00000385033 90 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 MIR519A1-201ENST00000385257 85 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 AC002350.1-201ENST00000490759 375 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 RNA5SP170-201ENST00000517150 101 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 RNU7-10P-201ENST00000607194 63 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 AC025521.1-201ENST00000621624 286 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 uc_338.16-201ENST00000621804 95 ntBASIC1.04□□□□□ -2.24
PTPN7P35236 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
PTPN7P35236 RNU6-162P-201ENST00000516228 103 ntBASIC1.03□□□□□ -2.24
PTPN7P35236 AL513043.2-201ENST00000573941 143 ntBASIC1.03□□□□□ -2.24
PTPN7P35236 Y_RNA.32-201ENST00000362589 110 ntBASIC1.02□□□□□ -2.25
PTPN7P35236 SNORD36A-201ENST00000362874 73 ntBASIC1.02□□□□□ -2.25
PTPN7P35236 RNY4P30-201ENST00000410216 95 ntBASIC1.02□□□□□ -2.25
PTPN7P35236 SNORA31.14-201ENST00000516728 116 ntBASIC1.02□□□□□ -2.25
PTPN7P35236 RNU6-49P-201ENST00000384256 107 ntBASIC1.01□□□□□ -2.25
PTPN7P35236 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
PTPN7P35236 RNU6-1254P-201ENST00000391266 104 ntBASIC1.01□□□□□ -2.25
PTPN7P35236 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
PTPN7P35236 RNA5SP458-201ENST00000516188 119 ntBASIC1.01□□□□□ -2.25
PTPN7P35236 MIR5582-201ENST00000579697 68 ntBASIC1.01□□□□□ -2.25
PTPN7P35236 Y_RNA.190-201ENST00000363964 101 ntBASIC1□□□□□ -2.25
PTPN7P35236 RNU6-1131P-201ENST00000364955 107 ntBASIC1□□□□□ -2.25
PTPN7P35236 RNY1P7-201ENST00000384743 110 ntBASIC1□□□□□ -2.25
PTPN7P35236 RNU7-195P-201ENST00000458793 62 ntBASIC1□□□□□ -2.25
PTPN7P35236 AC138907.6-201ENST00000568401 126 ntBASIC1□□□□□ -2.25
PTPN7P35236 AC138869.1-201ENST00000568623 124 ntBASIC1□□□□□ -2.25
PTPN7P35236 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
PTPN7P35236 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
PTPN7P35236 Y_RNA.174-201ENST00000363781 105 ntBASIC0.99□□□□□ -2.25
PTPN7P35236 SNORD116-10-201ENST00000363791 102 ntBASIC0.99□□□□□ -2.25
PTPN7P35236 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
PTPN7P35236 SNORD99-201ENST00000408612 74 ntBASIC0.99□□□□□ -2.25
PTPN7P35236 AC244505.6-201ENST00000452829 130 ntBASIC0.99□□□□□ -2.25
PTPN7P35236 RNU6-237P-201ENST00000515985 71 ntBASIC0.99□□□□□ -2.25
PTPN7P35236 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
PTPN7P35236 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 Y_RNA.220-201ENST00000364244 109 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 Y_RNA.369-201ENST00000365568 117 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 AC244098.3-201ENST00000424803 96 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.98□□□□□ -2.25
PTPN7P35236 Y_RNA.43-201ENST00000362670 111 ntBASIC0.97□□□□□ -2.25
PTPN7P35236 RNU6-243P-201ENST00000391140 107 ntBASIC0.97□□□□□ -2.25
PTPN7P35236 Y_RNA.809-201ENST00000516058 95 ntBASIC0.97□□□□□ -2.25
PTPN7P35236 MIR3612-201ENST00000579753 87 ntBASIC0.97□□□□□ -2.25
PTPN7P35236 AL353765.1-201ENST00000605514 183 ntBASIC0.97□□□□□ -2.25
PTPN7P35236 RNA5SP117-201ENST00000365294 118 ntBASIC0.96□□□□□ -2.26
PTPN7P35236 RNU6-844P-201ENST00000517175 102 ntBASIC0.96□□□□□ -2.26
PTPN7P35236 MIR3124-201ENST00000582636 67 ntBASIC0.96□□□□□ -2.26
PTPN7P35236 RNU6-1255P-201ENST00000363434 112 ntBASIC0.95□□□□□ -2.26
PTPN7P35236 MIR599-201ENST00000385069 95 ntBASIC0.95□□□□□ -2.26
PTPN7P35236 MIR644A-201ENST00000385262 94 ntBASIC0.95□□□□□ -2.26
PTPN7P35236 Y_RNA.648-201ENST00000459455 110 ntBASIC0.95□□□□□ -2.26
PTPN7P35236 AC011195.1-201ENST00000578177 177 ntBASIC0.95□□□□□ -2.26
PTPN7P35236 snoU13.31-201ENST00000607291 104 ntBASIC0.95□□□□□ -2.26
PTPN7P35236 Y_RNA.327-201ENST00000365201 102 ntBASIC0.94□□□□□ -2.26
PTPN7P35236 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
PTPN7P35236 snoU13.11-201ENST00000459219 104 ntBASIC0.94□□□□□ -2.26
PTPN7P35236 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
PTPN7P35236 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
PTPN7P35236 RNU6-392P-201ENST00000364926 101 ntBASIC0.93□□□□□ -2.26
PTPN7P35236 RNU7-85P-201ENST00000458851 63 ntBASIC0.93□□□□□ -2.26
PTPN7P35236 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.93□□□□□ -2.26
PTPN7P35236 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.93□□□□□ -2.26
PTPN7P35236 MIR18A-201ENST00000362310 71 ntBASIC0.92□□□□□ -2.26
PTPN7P35236 AL603825.1-201ENST00000438481 80 ntBASIC0.92□□□□□ -2.26
PTPN7P35236 AC026421.1-201ENST00000519101 163 ntBASIC0.92□□□□□ -2.26
PTPN7P35236 MIR3678-201ENST00000578455 94 ntBASIC0.92□□□□□ -2.26
PTPN7P35236 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.92□□□□□ -2.26
PTPN7P35236 RNA5SP432-201ENST00000362480 116 ntBASIC0.91□□□□□ -2.26
PTPN7P35236 RNU6-957P-201ENST00000363652 99 ntBASIC0.91□□□□□ -2.26
PTPN7P35236 RNU6-524P-201ENST00000384270 107 ntBASIC0.91□□□□□ -2.26
PTPN7P35236 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
PTPN7P35236 AL606490.4-201ENST00000423117 127 ntBASIC0.91□□□□□ -2.26
PTPN7P35236 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
PTPN7P35236 RNA5SP403-201ENST00000363598 108 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 Y_RNA.221-201ENST00000364248 96 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 Y_RNA.283-201ENST00000364798 112 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 RNU6-294P-201ENST00000364999 102 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 Y_RNA.609-201ENST00000410669 89 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 AL161932.1-201ENST00000437408 146 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 SNORD4B-201ENST00000459083 72 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 RNU6-135P-201ENST00000516769 101 ntBASIC0.9□□□□□ -2.27
PTPN7P35236 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.9□□□□□ -2.27
PTPN7P35236 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
PTPN7P35236 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
PTPN7P35236 RNU6-75P-201ENST00000515944 104 ntBASIC0.89□□□□□ -2.27
PTPN7P35236 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
PTPN7P35236 MIR4498-201ENST00000577599 66 ntBASIC0.89□□□□□ -2.27
PTPN7P35236 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
PTPN7P35236 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
PTPN7P35236 Y_RNA.338-201ENST00000365320 114 ntBASIC0.88□□□□□ -2.27
PTPN7P35236 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
PTPN7P35236 SNORD28-201ENST00000384706 75 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms