Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
HOXC12P31275 AC008608.1-201ENST00000603910 127 ntBASIC1.34□□□□□ -2.19
HOXC12P31275 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
HOXC12P31275 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HOXC12P31275 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
HOXC12P31275 Y_RNA.56-201ENST00000362798 112 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 AL513043.2-201ENST00000573941 143 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 MIR548H5-201ENST00000580314 60 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 AL078603.1-201ENST00000603824 313 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 AL136317.1-201ENST00000612653 226 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 AC025521.1-201ENST00000621624 286 ntBASIC1.33□□□□□ -2.2
HOXC12P31275 SNORD116-10-201ENST00000363791 102 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 Y_RNA.536-201ENST00000384621 113 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 MIR516A2-201ENST00000384888 90 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 MIR516A1-201ENST00000385033 90 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 AC026421.1-201ENST00000519101 163 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 RNU7-10P-201ENST00000607194 63 ntBASIC1.32□□□□□ -2.2
HOXC12P31275 MIR200A-201ENST00000384875 90 ntBASIC1.31□□□□□ -2.2
HOXC12P31275 SNORD63B-201ENST00000411005 70 ntBASIC1.31□□□□□ -2.2
HOXC12P31275 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
HOXC12P31275 U7.7-201ENST00000459276 60 ntBASIC1.31□□□□□ -2.2
HOXC12P31275 RNU6-1110P-201ENST00000516462 101 ntBASIC1.31□□□□□ -2.2
HOXC12P31275 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HOXC12P31275 RNU6-1134P-201ENST00000365156 101 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 SNORD114-22-201ENST00000365423 72 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 RNU6-535P-201ENST00000384722 107 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 RNU7-106P-201ENST00000459514 67 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 TRAJ51-201ENST00000504127 63 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 RNA5SP480-201ENST00000516840 109 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.3□□□□□ -2.2
HOXC12P31275 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 MIR6734-201ENST00000621166 68 ntBASIC1.3□□□□□ -2.2
HOXC12P31275 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HOXC12P31275 MIR520H-201ENST00000385126 88 ntBASIC1.29□□□□□ -2.2
HOXC12P31275 RNU6-243P-201ENST00000391140 107 ntBASIC1.29□□□□□ -2.2
HOXC12P31275 RNU6-1254P-201ENST00000391266 104 ntBASIC1.29□□□□□ -2.2
HOXC12P31275 MIR1323-201ENST00000408090 73 ntBASIC1.29□□□□□ -2.2
HOXC12P31275 RNU6-448P-201ENST00000517052 107 ntBASIC1.29□□□□□ -2.2
HOXC12P31275 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
HOXC12P31275 AC092628.1-201ENST00000436250 252 ntBASIC1.28□□□□□ -2.2
HOXC12P31275 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.28□□□□□ -2.2
HOXC12P31275 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.28□□□□□ -2.2
HOXC12P31275 MIR4679-1-201ENST00000637619 75 ntBASIC1.28□□□□□ -2.2
HOXC12P31275 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
HOXC12P31275 Y_RNA.558-201ENST00000384685 113 ntBASIC1.27□□□□□ -2.21
HOXC12P31275 RNU6-291P-201ENST00000384720 107 ntBASIC1.27□□□□□ -2.21
HOXC12P31275 AP003327.1-201ENST00000529684 127 ntBASIC1.27□□□□□ -2.21
HOXC12P31275 SNORD36A-201ENST00000362874 73 ntBASIC1.26□□□□□ -2.21
HOXC12P31275 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
HOXC12P31275 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HOXC12P31275 SNORD114-26-201ENST00000363543 72 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 SNORD116-22-201ENST00000384430 92 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 Y_RNA.609-201ENST00000410669 89 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 RNU7-195P-201ENST00000458793 62 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 AC138907.6-201ENST00000568401 126 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 AC138869.1-201ENST00000568623 124 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
HOXC12P31275 RNA5SP245-201ENST00000364239 121 ntBASIC1.24□□□□□ -2.21
HOXC12P31275 MIR6078-201ENST00000611069 100 ntBASIC1.24□□□□□ -2.21
HOXC12P31275 AC022709.1-201ENST00000615967 87 ntBASIC1.24□□□□□ -2.21
HOXC12P31275 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
HOXC12P31275 Y_RNA.809-201ENST00000516058 95 ntBASIC1.23□□□□□ -2.21
HOXC12P31275 AC025627.3-201ENST00000582078 182 ntBASIC1.23□□□□□ -2.21
HOXC12P31275 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 Y_RNA.17-201ENST00000362433 111 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 SNORD73B-201ENST00000364394 72 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 MIR320A-201ENST00000385302 82 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 RNU6-519P-201ENST00000410590 108 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.22□□□□□ -2.21
HOXC12P31275 RNA5SP117-201ENST00000365294 118 ntBASIC1.21□□□□□ -2.22
HOXC12P31275 RNU6-1335P-201ENST00000365426 107 ntBASIC1.21□□□□□ -2.22
HOXC12P31275 snoU13.11-201ENST00000459219 104 ntBASIC1.21□□□□□ -2.22
HOXC12P31275 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
HOXC12P31275 SNORA31.14-201ENST00000516728 116 ntBASIC1.21□□□□□ -2.22
HOXC12P31275 MIR6515-201ENST00000619843 57 ntBASIC1.21□□□□□ -2.22
HOXC12P31275 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HOXC12P31275 RNU1-93P-201ENST00000364704 169 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 MIR519A1-201ENST00000385257 85 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 RNU6-402P-201ENST00000410678 103 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 Y_RNA.648-201ENST00000459455 110 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 AC002350.1-201ENST00000490759 375 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 MIR4668-201ENST00000582284 70 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 uc_338.16-201ENST00000621804 95 ntBASIC1.2□□□□□ -2.22
HOXC12P31275 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.2□□□□□ -2.22
HOXC12P31275 Y_RNA.32-201ENST00000362589 110 ntBASIC1.19□□□□□ -2.22
HOXC12P31275 Y_RNA.174-201ENST00000363781 105 ntBASIC1.19□□□□□ -2.22
HOXC12P31275 MIR599-201ENST00000385069 95 ntBASIC1.19□□□□□ -2.22
HOXC12P31275 RNU6-762P-201ENST00000517107 102 ntBASIC1.19□□□□□ -2.22
HOXC12P31275 IGLL4P-201ENST00000614590 133 ntBASIC1.19□□□□□ -2.22
HOXC12P31275 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.18□□□□□ -2.22
HOXC12P31275 RNU6-1260P-201ENST00000362944 107 ntBASIC1.18□□□□□ -2.22
HOXC12P31275 MIR450A2-201ENST00000385022 100 ntBASIC1.18□□□□□ -2.22
HOXC12P31275 Y_RNA.593-201ENST00000410292 98 ntBASIC1.18□□□□□ -2.22
HOXC12P31275 AC097635.1-201ENST00000450678 155 ntBASIC1.18□□□□□ -2.22
HOXC12P31275 MIR4536-1-201ENST00000583537 88 ntBASIC1.18□□□□□ -2.22
HOXC12P31275 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.18□□□□□ -2.22
HOXC12P31275 MIR6779-201ENST00000617283 64 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms