Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.1□□□□□ -2.07
COL8A1P27658 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.07
COL8A1P27658 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 DEFA7P-201ENST00000382676 285 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 RNU7-24P-201ENST00000458867 62 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 snoU13.25-201ENST00000458945 104 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 RNU7-185P-201ENST00000459215 60 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 AC026436.1-201ENST00000510537 270 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 GHRLOS.1-201ENST00000610995 70 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 AC073869.9-201ENST00000641610 120 ntBASIC2.09□□□□□ -2.07
COL8A1P27658 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL8A1P27658 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
COL8A1P27658 RNA5SP210-201ENST00000391034 120 ntBASIC2.08□□□□□ -2.08
COL8A1P27658 MIR1257-201ENST00000408490 117 ntBASIC2.08□□□□□ -2.08
COL8A1P27658 MIR1185-1-201ENST00000408598 86 ntBASIC2.08□□□□□ -2.08
COL8A1P27658 AL133373.1-201ENST00000497098 94 ntBASIC2.08□□□□□ -2.08
COL8A1P27658 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.08□□□□□ -2.08
COL8A1P27658 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL8A1P27658 AC023934.1-201ENST00000574529 2389 ntBASIC2.07□□□□□ -2.08
COL8A1P27658 SNORA67.1-201ENST00000364749 141 ntBASIC2.07□□□□□ -2.08
COL8A1P27658 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL8A1P27658 AC108667.1-201ENST00000428618 249 ntBASIC2.07□□□□□ -2.08
COL8A1P27658 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
COL8A1P27658 AC015688.6-201ENST00000577737 104 ntBASIC2.07□□□□□ -2.08
COL8A1P27658 MIR3938-201ENST00000582157 103 ntBASIC2.07□□□□□ -2.08
COL8A1P27658 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL8A1P27658 SNORD113-4-201ENST00000364802 75 ntBASIC2.06□□□□□ -2.08
COL8A1P27658 SNORD115-44-201ENST00000365391 82 ntBASIC2.06□□□□□ -2.08
COL8A1P27658 RNU6-1039P-201ENST00000383931 107 ntBASIC2.06□□□□□ -2.08
COL8A1P27658 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.06□□□□□ -2.08
COL8A1P27658 RNU6-287P-201ENST00000516230 98 ntBASIC2.06□□□□□ -2.08
COL8A1P27658 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
COL8A1P27658 RNA5SP95-201ENST00000410319 137 ntBASIC2.05□□□□□ -2.08
COL8A1P27658 RNA5SP82-201ENST00000516707 92 ntBASIC2.05□□□□□ -2.08
COL8A1P27658 RNU6-122P-201ENST00000516818 107 ntBASIC2.05□□□□□ -2.08
COL8A1P27658 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.05□□□□□ -2.08
COL8A1P27658 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL8A1P27658 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
COL8A1P27658 MIR6073-201ENST00000352083 89 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 MIR103A2-201ENST00000362154 78 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 RNU6-495P-201ENST00000362995 107 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 RNA5SP264-201ENST00000363115 107 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 JTBP1-201ENST00000441314 247 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A1P27658 MIR6509-201ENST00000614603 85 ntBASIC2.04□□□□□ -2.08
COL8A1P27658 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL8A1P27658 RNA5SP215-201ENST00000363440 122 ntBASIC2.03□□□□□ -2.08
COL8A1P27658 MIR216B-201ENST00000390186 82 ntBASIC2.03□□□□□ -2.08
COL8A1P27658 RNA5SP450-201ENST00000411206 102 ntBASIC2.03□□□□□ -2.08
COL8A1P27658 RNA5SP270-201ENST00000411361 118 ntBASIC2.03□□□□□ -2.08
COL8A1P27658 MIR8070-201ENST00000616510 88 ntBASIC2.03□□□□□ -2.08
COL8A1P27658 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
COL8A1P27658 RNU6-645P-201ENST00000364649 106 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 MIR499A-201ENST00000384903 122 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 SNORA17.3-201ENST00000391159 129 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 RNA5SP299-201ENST00000391203 116 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 SNORA26.9-201ENST00000391322 122 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 RNA5SP181-201ENST00000410246 98 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.02□□□□□ -2.09
COL8A1P27658 RNU6-947P-201ENST00000516264 106 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 MIR5092-201ENST00000583139 88 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 MIR1291-201ENST00000627649 87 ntBASIC2.02□□□□□ -2.09
COL8A1P27658 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL8A1P27658 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL8A1P27658 MIR144-201ENST00000384886 86 ntBASIC2.01□□□□□ -2.09
COL8A1P27658 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL8A1P27658 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.01□□□□□ -2.09
COL8A1P27658 MIR6845-201ENST00000613182 61 ntBASIC2.01□□□□□ -2.09
COL8A1P27658 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
COL8A1P27658 RNA5SP456-201ENST00000364002 114 ntBASIC2□□□□□ -2.09
COL8A1P27658 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
COL8A1P27658 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2□□□□□ -2.09
COL8A1P27658 AC244505.6-201ENST00000452829 130 ntBASIC2□□□□□ -2.09
COL8A1P27658 RNU6-92P-201ENST00000605893 104 ntBASIC2□□□□□ -2.09
COL8A1P27658 snoU13.31-201ENST00000607291 104 ntBASIC2□□□□□ -2.09
COL8A1P27658 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL8A1P27658 AC080100.1-201ENST00000624239 5356 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 MIR7-2-201ENST00000384970 110 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 MIR125B2-201ENST00000385128 89 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 MIR524-201ENST00000385242 87 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 SNORA31.11-201ENST00000516528 139 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 MIR6895-201ENST00000613497 78 ntBASIC1.99□□□□□ -2.09
COL8A1P27658 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.99□□□□□ -2.09
COL8A1P27658 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.99□□□□□ -2.09
COL8A1P27658 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL8A1P27658 RNA5SP245-201ENST00000364239 121 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 RNU6-535P-201ENST00000384722 107 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 MIR203A-201ENST00000384836 110 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 RNU6-321P-201ENST00000410912 106 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 snoU13.21-201ENST00000459368 105 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 NAMPTP3-201ENST00000569273 224 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 MIR4658-201ENST00000584344 65 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 MIR3657-201ENST00000584818 117 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 AL645939.4-201ENST00000604495 135 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
COL8A1P27658 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 310.2 ms