Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RNU6-369P-201ENST00000362515 102 ntBASIC1.54□□□□□ -2.16
LMO1P25800 SNORD113.1-201ENST00000363280 73 ntBASIC1.54□□□□□ -2.16
LMO1P25800 SNORA16.1-201ENST00000364597 132 ntBASIC1.54□□□□□ -2.16
LMO1P25800 RNU6-1187P-201ENST00000364771 110 ntBASIC1.54□□□□□ -2.16
LMO1P25800 Y_RNA.371-201ENST00000365591 113 ntBASIC1.54□□□□□ -2.16
LMO1P25800 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
LMO1P25800 Y_RNA.588-201ENST00000391254 102 ntBASIC1.54□□□□□ -2.16
LMO1P25800 AC004965.1-201ENST00000413033 213 ntBASIC1.54□□□□□ -2.16
LMO1P25800 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
LMO1P25800 RNU6-881P-201ENST00000516813 102 ntBASIC1.54□□□□□ -2.16
LMO1P25800 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
LMO1P25800 SNORA44.1-201ENST00000517031 108 ntBASIC1.54□□□□□ -2.16
LMO1P25800 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
LMO1P25800 MIR8074-201ENST00000615081 81 ntBASIC1.54□□□□□ -2.16
LMO1P25800 U6.100-201ENST00000636230 99 ntBASIC1.54□□□□□ -2.16
LMO1P25800 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LMO1P25800 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
LMO1P25800 Y_RNA.354-201ENST00000365448 111 ntBASIC1.53□□□□□ -2.16
LMO1P25800 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LMO1P25800 SNORD63B-201ENST00000411005 70 ntBASIC1.53□□□□□ -2.16
LMO1P25800 TRAJ51-201ENST00000504127 63 ntBASIC1.53□□□□□ -2.16
LMO1P25800 RNU6-1194P-201ENST00000516208 104 ntBASIC1.53□□□□□ -2.16
LMO1P25800 SNORA77B-201ENST00000578179 125 ntBASIC1.53□□□□□ -2.16
LMO1P25800 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
LMO1P25800 MTRNR2L2-201ENST00000604882 87 ntBASIC1.53□□□□□ -2.16
LMO1P25800 MIR6845-201ENST00000613182 61 ntBASIC1.53□□□□□ -2.16
LMO1P25800 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.53□□□□□ -2.16
LMO1P25800 AC103706.3-201ENST00000636297 85 ntBASIC1.53□□□□□ -2.16
LMO1P25800 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LMO1P25800 RNU6-604P-201ENST00000390917 100 ntBASIC1.52□□□□□ -2.17
LMO1P25800 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.52□□□□□ -2.17
LMO1P25800 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
LMO1P25800 RNU6-982P-201ENST00000516216 102 ntBASIC1.52□□□□□ -2.17
LMO1P25800 RNU7-43P-201ENST00000516554 64 ntBASIC1.52□□□□□ -2.17
LMO1P25800 SNORA25.16-201ENST00000516741 121 ntBASIC1.52□□□□□ -2.17
LMO1P25800 MIR4498-201ENST00000577599 66 ntBASIC1.52□□□□□ -2.17
LMO1P25800 MIR3675-201ENST00000583661 73 ntBASIC1.52□□□□□ -2.17
LMO1P25800 MIR4251-201ENST00000635819 61 ntBASIC1.52□□□□□ -2.17
LMO1P25800 RNU6-1079P-201ENST00000362861 110 ntBASIC1.51□□□□□ -2.17
LMO1P25800 RNU6-439P-201ENST00000384188 106 ntBASIC1.51□□□□□ -2.17
LMO1P25800 SNORD38B-201ENST00000384690 67 ntBASIC1.51□□□□□ -2.17
LMO1P25800 MIR588-201ENST00000384900 83 ntBASIC1.51□□□□□ -2.17
LMO1P25800 MIR30A-201ENST00000385092 71 ntBASIC1.51□□□□□ -2.17
LMO1P25800 MIR548U-201ENST00000390728 81 ntBASIC1.51□□□□□ -2.17
LMO1P25800 RNU7-195P-201ENST00000458793 62 ntBASIC1.51□□□□□ -2.17
LMO1P25800 RNU6-531P-201ENST00000516694 104 ntBASIC1.51□□□□□ -2.17
LMO1P25800 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
LMO1P25800 MIR4696-201ENST00000581431 70 ntBASIC1.51□□□□□ -2.17
LMO1P25800 SNORD38B-202ENST00000625943 69 ntBASIC1.51□□□□□ -2.17
LMO1P25800 SNORD45.1-201ENST00000363181 77 ntBASIC1.5□□□□□ -2.17
LMO1P25800 SNORD41-201ENST00000386967 70 ntBASIC1.5□□□□□ -2.17
LMO1P25800 RNU6-243P-201ENST00000391140 107 ntBASIC1.5□□□□□ -2.17
LMO1P25800 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.5□□□□□ -2.17
LMO1P25800 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
LMO1P25800 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.5□□□□□ -2.17
LMO1P25800 RNA5SP237-201ENST00000410414 113 ntBASIC1.49□□□□□ -2.17
LMO1P25800 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
LMO1P25800 MIR4491-201ENST00000581087 68 ntBASIC1.49□□□□□ -2.17
LMO1P25800 AL357312.1-201ENST00000603879 298 ntBASIC1.49□□□□□ -2.17
LMO1P25800 AL096861.1-201ENST00000610899 123 ntBASIC1.49□□□□□ -2.17
LMO1P25800 TRDV1-202ENST00000621643 102 ntBASIC1.49□□□□□ -2.17
LMO1P25800 MIR378A-201ENST00000362177 66 ntBASIC1.48□□□□□ -2.17
LMO1P25800 RNU6-1216P-201ENST00000362590 107 ntBASIC1.48□□□□□ -2.17
LMO1P25800 RNU6-1067P-201ENST00000384752 107 ntBASIC1.48□□□□□ -2.17
LMO1P25800 MIR520C-201ENST00000385005 87 ntBASIC1.48□□□□□ -2.17
LMO1P25800 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
LMO1P25800 MIR653-201ENST00000385279 96 ntBASIC1.48□□□□□ -2.17
LMO1P25800 RNU6-466P-201ENST00000391224 103 ntBASIC1.48□□□□□ -2.17
LMO1P25800 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.48□□□□□ -2.17
LMO1P25800 AC015688.6-201ENST00000577737 104 ntBASIC1.48□□□□□ -2.17
LMO1P25800 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
LMO1P25800 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LMO1P25800 RNU6-664P-201ENST00000362381 107 ntBASIC1.47□□□□□ -2.17
LMO1P25800 SNORD100-201ENST00000408573 76 ntBASIC1.47□□□□□ -2.17
LMO1P25800 SNORA25.15-201ENST00000516487 89 ntBASIC1.47□□□□□ -2.17
LMO1P25800 SNORA40.17-201ENST00000517256 115 ntBASIC1.47□□□□□ -2.17
LMO1P25800 AP003716.2-201ENST00000528260 108 ntBASIC1.47□□□□□ -2.17
LMO1P25800 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.47□□□□□ -2.17
LMO1P25800 SNORA4-201ENST00000584302 138 ntBASIC1.47□□□□□ -2.17
LMO1P25800 MIR4781-201ENST00000585250 76 ntBASIC1.47□□□□□ -2.17
LMO1P25800 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.47□□□□□ -2.17
LMO1P25800 AC092634.7-201ENST00000621022 103 ntBASIC1.47□□□□□ -2.17
LMO1P25800 AC023934.1-201ENST00000574529 2389 ntBASIC1.47□□□□□ -2.17
LMO1P25800 Y_RNA.226-201ENST00000364337 114 ntBASIC1.46□□□□□ -2.18
LMO1P25800 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
LMO1P25800 RNU6-895P-201ENST00000384125 103 ntBASIC1.46□□□□□ -2.18
LMO1P25800 MIR513A1-201ENST00000385138 129 ntBASIC1.46□□□□□ -2.18
LMO1P25800 MIR519A1-201ENST00000385257 85 ntBASIC1.46□□□□□ -2.18
LMO1P25800 RNU6-1165P-201ENST00000410119 107 ntBASIC1.46□□□□□ -2.18
LMO1P25800 AC108667.1-201ENST00000428618 249 ntBASIC1.46□□□□□ -2.18
LMO1P25800 AC003989.2-201ENST00000440224 169 ntBASIC1.46□□□□□ -2.18
LMO1P25800 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
LMO1P25800 MIR4255-201ENST00000579351 72 ntBASIC1.46□□□□□ -2.18
LMO1P25800 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.46□□□□□ -2.18
LMO1P25800 snoU13.31-201ENST00000607291 104 ntBASIC1.46□□□□□ -2.18
LMO1P25800 SNORD33-201ENST00000362761 85 ntBASIC1.45□□□□□ -2.18
LMO1P25800 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
LMO1P25800 RNU6-382P-201ENST00000365181 106 ntBASIC1.45□□□□□ -2.18
LMO1P25800 MIR1287-201ENST00000408492 90 ntBASIC1.45□□□□□ -2.18
LMO1P25800 RNU6-1052P-201ENST00000411398 104 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms