Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 U7.3-201ENST00000616123 62 ntBASIC1.1□□□□□ -2.23
XPAP23025 AC025521.1-201ENST00000621624 286 ntBASIC1.1□□□□□ -2.23
XPAP23025 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
XPAP23025 Y_RNA.56-201ENST00000362798 112 ntBASIC1.09□□□□□ -2.23
XPAP23025 Y_RNA.57-201ENST00000362806 113 ntBASIC1.09□□□□□ -2.23
XPAP23025 SNORA25.9-201ENST00000365087 128 ntBASIC1.09□□□□□ -2.23
XPAP23025 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
XPAP23025 RNY4P30-201ENST00000410216 95 ntBASIC1.09□□□□□ -2.23
XPAP23025 SNORD63B-201ENST00000411005 70 ntBASIC1.09□□□□□ -2.23
XPAP23025 Y_RNA.705-201ENST00000516862 110 ntBASIC1.09□□□□□ -2.23
XPAP23025 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.09□□□□□ -2.23
XPAP23025 MIR8070-201ENST00000616510 88 ntBASIC1.09□□□□□ -2.23
XPAP23025 Y_RNA.290-201ENST00000364879 114 ntBASIC1.08□□□□□ -2.24
XPAP23025 AC092628.1-201ENST00000436250 252 ntBASIC1.08□□□□□ -2.24
XPAP23025 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
XPAP23025 Y_RNA.32-201ENST00000362589 110 ntBASIC1.07□□□□□ -2.24
XPAP23025 RNY1P7-201ENST00000384743 110 ntBASIC1.07□□□□□ -2.24
XPAP23025 MIR635-201ENST00000384830 98 ntBASIC1.07□□□□□ -2.24
XPAP23025 SNORD99-201ENST00000408612 74 ntBASIC1.07□□□□□ -2.24
XPAP23025 RNU6-887P-201ENST00000410660 100 ntBASIC1.07□□□□□ -2.24
XPAP23025 AC002350.1-201ENST00000490759 375 ntBASIC1.07□□□□□ -2.24
XPAP23025 SNORA31.14-201ENST00000516728 116 ntBASIC1.07□□□□□ -2.24
XPAP23025 RNA5SP102-201ENST00000516865 106 ntBASIC1.07□□□□□ -2.24
XPAP23025 AP003327.1-201ENST00000529684 127 ntBASIC1.07□□□□□ -2.24
XPAP23025 AL513043.2-201ENST00000573941 143 ntBASIC1.07□□□□□ -2.24
XPAP23025 MALAT1.1-201ENST00000618249 95 ntBASIC1.07□□□□□ -2.24
XPAP23025 MIR2052-201ENST00000636055 55 ntBASIC1.07□□□□□ -2.24
XPAP23025 RNU6-1125P-201ENST00000363601 107 ntBASIC1.06□□□□□ -2.24
XPAP23025 Y_RNA.190-201ENST00000363964 101 ntBASIC1.06□□□□□ -2.24
XPAP23025 RNU6-1131P-201ENST00000364955 107 ntBASIC1.06□□□□□ -2.24
XPAP23025 RNU6-49P-201ENST00000384256 107 ntBASIC1.06□□□□□ -2.24
XPAP23025 RNU6-480P-201ENST00000384332 107 ntBASIC1.06□□□□□ -2.24
XPAP23025 RNU7-195P-201ENST00000458793 62 ntBASIC1.06□□□□□ -2.24
XPAP23025 MIR548H5-201ENST00000580314 60 ntBASIC1.06□□□□□ -2.24
XPAP23025 uc_338.16-201ENST00000621804 95 ntBASIC1.06□□□□□ -2.24
XPAP23025 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
XPAP23025 SNORD58A-201ENST00000383875 65 ntBASIC1.05□□□□□ -2.24
XPAP23025 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
XPAP23025 RNU6-972P-201ENST00000391208 107 ntBASIC1.05□□□□□ -2.24
XPAP23025 RNA5SP170-201ENST00000517150 101 ntBASIC1.05□□□□□ -2.24
XPAP23025 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
XPAP23025 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.05□□□□□ -2.24
XPAP23025 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
XPAP23025 SNORD36A-201ENST00000362874 73 ntBASIC1.04□□□□□ -2.24
XPAP23025 MIR5582-201ENST00000579697 68 ntBASIC1.04□□□□□ -2.24
XPAP23025 AC025627.3-201ENST00000582078 182 ntBASIC1.04□□□□□ -2.24
XPAP23025 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
XPAP23025 MIR499A-201ENST00000384903 122 ntBASIC1.03□□□□□ -2.24
XPAP23025 RNU6-1254P-201ENST00000391266 104 ntBASIC1.03□□□□□ -2.24
XPAP23025 AC244098.3-201ENST00000424803 96 ntBASIC1.03□□□□□ -2.24
XPAP23025 Y_RNA.694-201ENST00000516677 117 ntBASIC1.03□□□□□ -2.24
XPAP23025 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
XPAP23025 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
XPAP23025 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.03□□□□□ -2.24
XPAP23025 MIR644A-201ENST00000385262 94 ntBASIC1.02□□□□□ -2.25
XPAP23025 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
XPAP23025 Y_RNA.191-201ENST00000363972 113 ntBASIC1.01□□□□□ -2.25
XPAP23025 MIR1276-201ENST00000408707 83 ntBASIC1.01□□□□□ -2.25
XPAP23025 AC138907.6-201ENST00000568401 126 ntBASIC1.01□□□□□ -2.25
XPAP23025 AC138869.1-201ENST00000568623 124 ntBASIC1.01□□□□□ -2.25
XPAP23025 RNU7-10P-201ENST00000607194 63 ntBASIC1.01□□□□□ -2.25
XPAP23025 Y_RNA.96-201ENST00000363092 109 ntBASIC1□□□□□ -2.25
XPAP23025 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
XPAP23025 RNU6-243P-201ENST00000391140 107 ntBASIC1□□□□□ -2.25
XPAP23025 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
XPAP23025 AL161932.1-201ENST00000437408 146 ntBASIC1□□□□□ -2.25
XPAP23025 snoU13.11-201ENST00000459219 104 ntBASIC1□□□□□ -2.25
XPAP23025 Y_RNA.809-201ENST00000516058 95 ntBASIC1□□□□□ -2.25
XPAP23025 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
XPAP23025 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
XPAP23025 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
XPAP23025 MIR519A1-201ENST00000385257 85 ntBASIC0.99□□□□□ -2.25
XPAP23025 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.99□□□□□ -2.25
XPAP23025 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
XPAP23025 AL353765.1-201ENST00000605514 183 ntBASIC0.99□□□□□ -2.25
XPAP23025 SNORD116-10-201ENST00000363791 102 ntBASIC0.98□□□□□ -2.25
XPAP23025 Y_RNA.220-201ENST00000364244 109 ntBASIC0.98□□□□□ -2.25
XPAP23025 Y_RNA.226-201ENST00000364337 114 ntBASIC0.98□□□□□ -2.25
XPAP23025 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
XPAP23025 MIR1287-201ENST00000408492 90 ntBASIC0.98□□□□□ -2.25
XPAP23025 AL606490.4-201ENST00000423117 127 ntBASIC0.98□□□□□ -2.25
XPAP23025 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
XPAP23025 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
XPAP23025 Y_RNA.174-201ENST00000363781 105 ntBASIC0.97□□□□□ -2.25
XPAP23025 Y_RNA.221-201ENST00000364248 96 ntBASIC0.97□□□□□ -2.25
XPAP23025 Y_RNA.224-201ENST00000364308 111 ntBASIC0.97□□□□□ -2.25
XPAP23025 AC244505.6-201ENST00000452829 130 ntBASIC0.97□□□□□ -2.25
XPAP23025 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
XPAP23025 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
XPAP23025 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.97□□□□□ -2.25
XPAP23025 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
XPAP23025 RNU6-1260P-201ENST00000362944 107 ntBASIC0.96□□□□□ -2.26
XPAP23025 RNU6-1255P-201ENST00000363434 112 ntBASIC0.96□□□□□ -2.26
XPAP23025 RNU6-957P-201ENST00000363652 99 ntBASIC0.96□□□□□ -2.26
XPAP23025 RNU6-524P-201ENST00000384270 107 ntBASIC0.96□□□□□ -2.26
XPAP23025 RNU7-85P-201ENST00000458851 63 ntBASIC0.96□□□□□ -2.26
XPAP23025 AC026421.1-201ENST00000519101 163 ntBASIC0.96□□□□□ -2.26
XPAP23025 MIR3678-201ENST00000578455 94 ntBASIC0.96□□□□□ -2.26
XPAP23025 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
XPAP23025 MIR18A-201ENST00000362310 71 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms