Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU6-243P-201ENST00000391140 107 ntBASIC1.1□□□□□ -2.23
ATF4P18848 RNU6-972P-201ENST00000391208 107 ntBASIC1.1□□□□□ -2.23
ATF4P18848 RNU6-1254P-201ENST00000391266 104 ntBASIC1.1□□□□□ -2.23
ATF4P18848 RNA5SP222-201ENST00000411039 105 ntBASIC1.1□□□□□ -2.23
ATF4P18848 RNU6-158P-201ENST00000517104 100 ntBASIC1.1□□□□□ -2.23
ATF4P18848 MIR4777-201ENST00000583710 86 ntBASIC1.1□□□□□ -2.23
ATF4P18848 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
ATF4P18848 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
ATF4P18848 Y_RNA.467-201ENST00000384297 102 ntBASIC1.09□□□□□ -2.23
ATF4P18848 MIR516A2-201ENST00000384888 90 ntBASIC1.09□□□□□ -2.23
ATF4P18848 MIR516A1-201ENST00000385033 90 ntBASIC1.09□□□□□ -2.23
ATF4P18848 MIR519A1-201ENST00000385257 85 ntBASIC1.09□□□□□ -2.23
ATF4P18848 AC097635.1-201ENST00000450678 155 ntBASIC1.09□□□□□ -2.23
ATF4P18848 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
ATF4P18848 AP001318.4-201ENST00000616637 121 ntBASIC1.09□□□□□ -2.23
ATF4P18848 MIR181B2-201ENST00000385004 89 ntBASIC1.08□□□□□ -2.24
ATF4P18848 MTATP6P29-201ENST00000415057 132 ntBASIC1.08□□□□□ -2.24
ATF4P18848 Y_RNA.809-201ENST00000516058 95 ntBASIC1.08□□□□□ -2.24
ATF4P18848 MIR4421-201ENST00000578133 69 ntBASIC1.08□□□□□ -2.24
ATF4P18848 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
ATF4P18848 RNA5SP245-201ENST00000364239 121 ntBASIC1.07□□□□□ -2.24
ATF4P18848 Y_RNA.226-201ENST00000364337 114 ntBASIC1.07□□□□□ -2.24
ATF4P18848 AC244505.6-201ENST00000452829 130 ntBASIC1.07□□□□□ -2.24
ATF4P18848 RNU6-168P-201ENST00000516189 101 ntBASIC1.07□□□□□ -2.24
ATF4P18848 Y_RNA.677-201ENST00000516401 85 ntBASIC1.07□□□□□ -2.24
ATF4P18848 RNU1-92P-201ENST00000517017 135 ntBASIC1.07□□□□□ -2.24
ATF4P18848 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.07□□□□□ -2.24
ATF4P18848 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
ATF4P18848 Y_RNA.164-201ENST00000363709 102 ntBASIC1.06□□□□□ -2.24
ATF4P18848 RNU6-1229P-201ENST00000364295 107 ntBASIC1.06□□□□□ -2.24
ATF4P18848 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
ATF4P18848 Y_RNA.466-201ENST00000384294 113 ntBASIC1.06□□□□□ -2.24
ATF4P18848 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
ATF4P18848 MIR599-201ENST00000385069 95 ntBASIC1.06□□□□□ -2.24
ATF4P18848 MIR644A-201ENST00000385262 94 ntBASIC1.06□□□□□ -2.24
ATF4P18848 RNU6-887P-201ENST00000410660 100 ntBASIC1.06□□□□□ -2.24
ATF4P18848 MTATP8P2-201ENST00000435212 202 ntBASIC1.06□□□□□ -2.24
ATF4P18848 RNU7-195P-201ENST00000458793 62 ntBASIC1.06□□□□□ -2.24
ATF4P18848 MIR3678-201ENST00000578455 94 ntBASIC1.06□□□□□ -2.24
ATF4P18848 MIR548Z-201ENST00000584743 97 ntBASIC1.06□□□□□ -2.24
ATF4P18848 AC103810.7-201ENST00000607821 91 ntBASIC1.06□□□□□ -2.24
ATF4P18848 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
ATF4P18848 RNU7-106P-201ENST00000459514 67 ntBASIC1.05□□□□□ -2.24
ATF4P18848 RNU6-1260P-201ENST00000362944 107 ntBASIC1.04□□□□□ -2.24
ATF4P18848 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
ATF4P18848 RNU6-644P-201ENST00000391155 98 ntBASIC1.04□□□□□ -2.24
ATF4P18848 PSMC1P5-201ENST00000512850 177 ntBASIC1.04□□□□□ -2.24
ATF4P18848 RNU7-61P-201ENST00000515897 61 ntBASIC1.04□□□□□ -2.24
ATF4P18848 MIR8070-201ENST00000616510 88 ntBASIC1.04□□□□□ -2.24
ATF4P18848 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.04□□□□□ -2.24
ATF4P18848 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
ATF4P18848 MIR1287-201ENST00000408492 90 ntBASIC1.03□□□□□ -2.24
ATF4P18848 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.03□□□□□ -2.24
ATF4P18848 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
ATF4P18848 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.03□□□□□ -2.24
ATF4P18848 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
ATF4P18848 RNA5SP89-201ENST00000410300 108 ntBASIC1.02□□□□□ -2.25
ATF4P18848 MIR4639-201ENST00000584938 69 ntBASIC1.02□□□□□ -2.25
ATF4P18848 SNORD36A-201ENST00000362874 73 ntBASIC1.01□□□□□ -2.25
ATF4P18848 SNORD115-24-201ENST00000363528 82 ntBASIC1.01□□□□□ -2.25
ATF4P18848 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
ATF4P18848 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
ATF4P18848 Y_RNA.348-201ENST00000365403 103 ntBASIC1□□□□□ -2.25
ATF4P18848 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1□□□□□ -2.25
ATF4P18848 AL513043.2-201ENST00000573941 143 ntBASIC1□□□□□ -2.25
ATF4P18848 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
ATF4P18848 AC025521.1-201ENST00000621624 286 ntBASIC1□□□□□ -2.25
ATF4P18848 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1□□□□□ -2.25
ATF4P18848 SNORD116-10-201ENST00000363791 102 ntBASIC0.99□□□□□ -2.25
ATF4P18848 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
ATF4P18848 SNORD58A-201ENST00000383875 65 ntBASIC0.99□□□□□ -2.25
ATF4P18848 RNU6-466P-201ENST00000391224 103 ntBASIC0.99□□□□□ -2.25
ATF4P18848 RNU1-123P-201ENST00000458950 160 ntBASIC0.99□□□□□ -2.25
ATF4P18848 MIR3660-201ENST00000584845 100 ntBASIC0.99□□□□□ -2.25
ATF4P18848 MIR6504-201ENST00000613520 61 ntBASIC0.99□□□□□ -2.25
ATF4P18848 SNORD18A-201ENST00000363753 72 ntBASIC0.98□□□□□ -2.25
ATF4P18848 Y_RNA.221-201ENST00000364248 96 ntBASIC0.98□□□□□ -2.25
ATF4P18848 RNU6-524P-201ENST00000384270 107 ntBASIC0.98□□□□□ -2.25
ATF4P18848 SNORD28-201ENST00000384706 75 ntBASIC0.98□□□□□ -2.25
ATF4P18848 MIR1276-201ENST00000408707 83 ntBASIC0.98□□□□□ -2.25
ATF4P18848 MIR518E-201ENST00000385252 88 ntBASIC0.97□□□□□ -2.25
ATF4P18848 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
ATF4P18848 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
ATF4P18848 U7.3-201ENST00000616123 62 ntBASIC0.97□□□□□ -2.25
ATF4P18848 MIR140-201ENST00000385282 100 ntBASIC0.96□□□□□ -2.26
ATF4P18848 SNORA40.6-201ENST00000391153 128 ntBASIC0.96□□□□□ -2.26
ATF4P18848 Y_RNA.648-201ENST00000459455 110 ntBASIC0.96□□□□□ -2.26
ATF4P18848 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
ATF4P18848 AC244669.1-204ENST00000621564 178 ntBASIC0.96□□□□□ -2.26
ATF4P18848 RNU6-162P-201ENST00000516228 103 ntBASIC0.95□□□□□ -2.26
ATF4P18848 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
ATF4P18848 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.95□□□□□ -2.26
ATF4P18848 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ATF4P18848 RNU6-905P-201ENST00000384434 107 ntBASIC0.94□□□□□ -2.26
ATF4P18848 RNA5SP94-201ENST00000516917 108 ntBASIC0.94□□□□□ -2.26
ATF4P18848 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
ATF4P18848 MIR548L-201ENST00000408303 86 ntBASIC0.93□□□□□ -2.26
ATF4P18848 AC004223.1-201ENST00000479840 271 ntBASIC0.93□□□□□ -2.26
ATF4P18848 SCARNA16.5-201ENST00000517114 183 ntBASIC0.93□□□□□ -2.26
ATF4P18848 RNA5SP47-201ENST00000517230 109 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 298.3 ms