Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORD92-201ENST00000585078 85 ntBASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-466P-201ENST00000391224 103 ntBASIC2.28□□□□□ -2.04
CSB-PGBD3P0DP91 Y_RNA.355-201ENST00000365462 98 ntBASIC2.27□□□□□ -2.05
CSB-PGBD3P0DP91 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-70P-201ENST00000516438 60 ntBASIC2.27□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-687P-201ENST00000516443 89 ntBASIC2.27□□□□□ -2.05
CSB-PGBD3P0DP91 MIR4255-201ENST00000579351 72 ntBASIC2.27□□□□□ -2.05
CSB-PGBD3P0DP91 MIR103A2-201ENST00000362154 78 ntBASIC2.26□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-208P-201ENST00000362431 107 ntBASIC2.26□□□□□ -2.05
CSB-PGBD3P0DP91 MIR518E-201ENST00000385252 88 ntBASIC2.26□□□□□ -2.05
CSB-PGBD3P0DP91 MIR548U-201ENST00000390728 81 ntBASIC2.26□□□□□ -2.05
CSB-PGBD3P0DP91 MIR4419B-201ENST00000577260 68 ntBASIC2.26□□□□□ -2.05
CSB-PGBD3P0DP91 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.26□□□□□ -2.05
CSB-PGBD3P0DP91 RNA5SP264-201ENST00000363115 107 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 RNU4-58P-201ENST00000363192 141 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 SNORD93-201ENST00000408813 74 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 AL606490.4-201ENST00000423117 127 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 AC015818.7-201ENST00000428754 109 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-1194P-201ENST00000516208 104 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 RN7SKP88-201ENST00000516847 250 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-902P-201ENST00000517212 91 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 7SK.8-201ENST00000612110 250 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 7SK.11-201ENST00000615477 250 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 7SK.13-201ENST00000622040 250 ntBASIC2.25□□□□□ -2.05
CSB-PGBD3P0DP91 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
CSB-PGBD3P0DP91 SNORD100-201ENST00000408573 76 ntBASIC2.24□□□□□ -2.05
CSB-PGBD3P0DP91 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.24□□□□□ -2.05
CSB-PGBD3P0DP91 TRAJ51-201ENST00000504127 63 ntBASIC2.24□□□□□ -2.05
CSB-PGBD3P0DP91 SNORD53B-201ENST00000577887 78 ntBASIC2.24□□□□□ -2.05
CSB-PGBD3P0DP91 RNU1-42P-201ENST00000364033 160 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 RNU1-36P-201ENST00000365130 165 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 AC074348.1-201ENST00000426503 132 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 RNU7-195P-201ENST00000458793 62 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 snoU13.17-201ENST00000458802 104 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-807P-201ENST00000516805 107 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 AL645939.4-201ENST00000604495 135 ntBASIC2.23□□□□□ -2.05
CSB-PGBD3P0DP91 MIR377-201ENST00000362145 69 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-403P-201ENST00000363163 104 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 Y_RNA.264-201ENST00000364665 102 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 snoU13.21-201ENST00000459368 105 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 RNU11-2P-201ENST00000516898 142 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-303P-201ENST00000517091 106 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 AC013244.2-201ENST00000603396 103 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 MIR1297-201ENST00000637311 77 ntBASIC2.22□□□□□ -2.05
CSB-PGBD3P0DP91 RNU6-580P-201ENST00000365159 107 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.327-201ENST00000365201 102 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-53P-201ENST00000365367 106 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-634P-201ENST00000459134 106 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-871P-201ENST00000516122 100 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.681-201ENST00000516445 113 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.21□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.12-201ENST00000362393 112 ntBASIC2.2□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.536-201ENST00000384621 113 ntBASIC2.2□□□□□ -2.06
CSB-PGBD3P0DP91 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.2□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-1054P-201ENST00000411293 104 ntBASIC2.19□□□□□ -2.06
CSB-PGBD3P0DP91 MIR18B-201ENST00000454574 71 ntBASIC2.19□□□□□ -2.06
CSB-PGBD3P0DP91 AC048334.1-201ENST00000477975 159 ntBASIC2.19□□□□□ -2.06
CSB-PGBD3P0DP91 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.19□□□□□ -2.06
CSB-PGBD3P0DP91 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSB-PGBD3P0DP91 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-330P-201ENST00000363015 107 ntBASIC2.18□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.386-201ENST00000383913 105 ntBASIC2.18□□□□□ -2.06
CSB-PGBD3P0DP91 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-587P-201ENST00000391282 106 ntBASIC2.18□□□□□ -2.06
CSB-PGBD3P0DP91 MIR1265-201ENST00000408444 86 ntBASIC2.18□□□□□ -2.06
CSB-PGBD3P0DP91 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.18□□□□□ -2.06
CSB-PGBD3P0DP91 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 RNU5F-1-201ENST00000362507 117 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.340-201ENST00000365330 92 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-1051P-201ENST00000365471 102 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.596-201ENST00000410462 109 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 SNORA31.2-201ENST00000516019 134 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 TRDV1-202ENST00000621643 102 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 ZNF209P-201ENST00000593450 2304 ntBASIC2.17□□□□□ -2.06
CSB-PGBD3P0DP91 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.13-201ENST00000362403 112 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 Y_RNA.224-201ENST00000364308 111 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 RNU6-540P-201ENST00000384622 101 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 SNORA67.6-201ENST00000391093 99 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 RNU7-185P-201ENST00000459215 60 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 YWHAEP2-201ENST00000580066 112 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 MIR4285-201ENST00000581001 85 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 YWHAEP3-201ENST00000582767 121 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 AC023934.1-201ENST00000574529 2389 ntBASIC2.16□□□□□ -2.06
CSB-PGBD3P0DP91 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CSB-PGBD3P0DP91 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.06
CSB-PGBD3P0DP91 MIR101-2-201ENST00000362195 79 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.207-201ENST00000364142 106 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 MIR519A1-201ENST00000385257 85 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 AC092628.1-201ENST00000436250 252 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 AC125388.1-201ENST00000459631 156 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms