Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC023934.1-201ENST00000574529 2389 ntBASIC1.79□□□□□ -2.12
NEFMP07197 SNORD113.3-201ENST00000364630 78 ntBASIC1.78□□□□□ -2.12
NEFMP07197 SNORD26-201ENST00000384147 75 ntBASIC1.78□□□□□ -2.12
NEFMP07197 RNU6-466P-201ENST00000391224 103 ntBASIC1.78□□□□□ -2.12
NEFMP07197 RPS27P16-201ENST00000425758 201 ntBASIC1.78□□□□□ -2.12
NEFMP07197 RNU7-185P-201ENST00000459215 60 ntBASIC1.78□□□□□ -2.12
NEFMP07197 SNORA25.13-201ENST00000516395 103 ntBASIC1.78□□□□□ -2.12
NEFMP07197 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.78□□□□□ -2.12
NEFMP07197 MIR101-2-201ENST00000362195 79 ntBASIC1.77□□□□□ -2.13
NEFMP07197 MIR337-201ENST00000362281 93 ntBASIC1.77□□□□□ -2.13
NEFMP07197 RNU6-315P-201ENST00000362666 107 ntBASIC1.77□□□□□ -2.13
NEFMP07197 Y_RNA.94-201ENST00000363068 106 ntBASIC1.77□□□□□ -2.13
NEFMP07197 MIR1287-201ENST00000408492 90 ntBASIC1.77□□□□□ -2.13
NEFMP07197 SNORD63B-201ENST00000411005 70 ntBASIC1.77□□□□□ -2.13
NEFMP07197 RNU1-123P-201ENST00000458950 160 ntBASIC1.77□□□□□ -2.13
NEFMP07197 snoU13.11-201ENST00000459219 104 ntBASIC1.77□□□□□ -2.13
NEFMP07197 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
NEFMP07197 RNU7-153P-201ENST00000516455 62 ntBASIC1.77□□□□□ -2.13
NEFMP07197 MIR548H5-201ENST00000580314 60 ntBASIC1.77□□□□□ -2.13
NEFMP07197 MIR4536-1-201ENST00000583537 88 ntBASIC1.77□□□□□ -2.13
NEFMP07197 AL353770.2-201ENST00000620024 78 ntBASIC1.77□□□□□ -2.13
NEFMP07197 Y_RNA.283-201ENST00000364798 112 ntBASIC1.76□□□□□ -2.13
NEFMP07197 RNU6-811P-201ENST00000384069 107 ntBASIC1.76□□□□□ -2.13
NEFMP07197 Y_RNA.508-201ENST00000384502 114 ntBASIC1.76□□□□□ -2.13
NEFMP07197 RNU6-129P-201ENST00000391022 107 ntBASIC1.76□□□□□ -2.13
NEFMP07197 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.76□□□□□ -2.13
NEFMP07197 SNORD100-201ENST00000408573 76 ntBASIC1.76□□□□□ -2.13
NEFMP07197 RN7SKP88-201ENST00000516847 250 ntBASIC1.76□□□□□ -2.13
NEFMP07197 RNU6-765P-201ENST00000516916 99 ntBASIC1.76□□□□□ -2.13
NEFMP07197 7SK.8-201ENST00000612110 250 ntBASIC1.76□□□□□ -2.13
NEFMP07197 7SK.11-201ENST00000615477 250 ntBASIC1.76□□□□□ -2.13
NEFMP07197 MIR8070-201ENST00000616510 88 ntBASIC1.76□□□□□ -2.13
NEFMP07197 7SK.13-201ENST00000622040 250 ntBASIC1.76□□□□□ -2.13
NEFMP07197 Y_RNA.330-201ENST00000365230 109 ntBASIC1.75□□□□□ -2.13
NEFMP07197 MIR635-201ENST00000384830 98 ntBASIC1.75□□□□□ -2.13
NEFMP07197 AC048334.1-201ENST00000477975 159 ntBASIC1.75□□□□□ -2.13
NEFMP07197 SNORD92-201ENST00000585078 85 ntBASIC1.75□□□□□ -2.13
NEFMP07197 MIR6082-201ENST00000613604 109 ntBASIC1.75□□□□□ -2.13
NEFMP07197 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NEFMP07197 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NEFMP07197 RNU6-934P-201ENST00000365154 107 ntBASIC1.74□□□□□ -2.13
NEFMP07197 MIR519A1-201ENST00000385257 85 ntBASIC1.74□□□□□ -2.13
NEFMP07197 MIR548U-201ENST00000390728 81 ntBASIC1.74□□□□□ -2.13
NEFMP07197 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.74□□□□□ -2.13
NEFMP07197 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.74□□□□□ -2.13
NEFMP07197 MIR4796-201ENST00000580742 81 ntBASIC1.74□□□□□ -2.13
NEFMP07197 Y_RNA.56-201ENST00000362798 112 ntBASIC1.73□□□□□ -2.13
NEFMP07197 Y_RNA.536-201ENST00000384621 113 ntBASIC1.73□□□□□ -2.13
NEFMP07197 SNORD83.1-201ENST00000411362 77 ntBASIC1.73□□□□□ -2.13
NEFMP07197 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.73□□□□□ -2.13
NEFMP07197 RNU7-106P-201ENST00000459514 67 ntBASIC1.73□□□□□ -2.13
NEFMP07197 SNORA31.2-201ENST00000516019 134 ntBASIC1.73□□□□□ -2.13
NEFMP07197 AC036111.3-201ENST00000526389 112 ntBASIC1.73□□□□□ -2.13
NEFMP07197 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NEFMP07197 Y_RNA.13-201ENST00000362403 112 ntBASIC1.72□□□□□ -2.13
NEFMP07197 RNU6-624P-201ENST00000363411 107 ntBASIC1.72□□□□□ -2.13
NEFMP07197 RNU6-776P-201ENST00000364403 104 ntBASIC1.72□□□□□ -2.13
NEFMP07197 RNU6-1022P-201ENST00000365049 104 ntBASIC1.72□□□□□ -2.13
NEFMP07197 Y_RNA.327-201ENST00000365201 102 ntBASIC1.72□□□□□ -2.13
NEFMP07197 MIR758-201ENST00000390227 88 ntBASIC1.72□□□□□ -2.13
NEFMP07197 SNORA75.2-201ENST00000391138 150 ntBASIC1.72□□□□□ -2.13
NEFMP07197 SNORA75.3-201ENST00000391231 150 ntBASIC1.72□□□□□ -2.13
NEFMP07197 SNORD111-201ENST00000408139 94 ntBASIC1.72□□□□□ -2.13
NEFMP07197 snoU13.21-201ENST00000459368 105 ntBASIC1.72□□□□□ -2.13
NEFMP07197 AC013244.2-201ENST00000603396 103 ntBASIC1.72□□□□□ -2.13
NEFMP07197 MIR6078-201ENST00000611069 100 ntBASIC1.72□□□□□ -2.13
NEFMP07197 MIR125B2-201ENST00000385128 89 ntBASIC1.71□□□□□ -2.14
NEFMP07197 AL591704.2-201ENST00000421658 181 ntBASIC1.71□□□□□ -2.14
NEFMP07197 RNU6-75P-201ENST00000515944 104 ntBASIC1.71□□□□□ -2.14
NEFMP07197 MIR4771-2-201ENST00000577758 74 ntBASIC1.71□□□□□ -2.14
NEFMP07197 MIR4771-1-201ENST00000582617 74 ntBASIC1.71□□□□□ -2.14
NEFMP07197 AC106800.4-201ENST00000614905 153 ntBASIC1.71□□□□□ -2.14
NEFMP07197 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
NEFMP07197 RNU6-939P-201ENST00000384634 107 ntBASIC1.7□□□□□ -2.14
NEFMP07197 SNORA40.6-201ENST00000391153 128 ntBASIC1.7□□□□□ -2.14
NEFMP07197 TRAJ51-201ENST00000504127 63 ntBASIC1.7□□□□□ -2.14
NEFMP07197 FGF7P7-201ENST00000514120 227 ntBASIC1.7□□□□□ -2.14
NEFMP07197 Y_RNA.660-201ENST00000516002 120 ntBASIC1.7□□□□□ -2.14
NEFMP07197 RNU6-557P-201ENST00000516842 110 ntBASIC1.7□□□□□ -2.14
NEFMP07197 AC104996.3-201ENST00000590718 94 ntBASIC1.7□□□□□ -2.14
NEFMP07197 RNU6-380P-201ENST00000410207 107 ntBASIC1.69□□□□□ -2.14
NEFMP07197 MIR3064-201ENST00000581130 66 ntBASIC1.69□□□□□ -2.14
NEFMP07197 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NEFMP07197 RNU6-1094P-201ENST00000362416 104 ntBASIC1.68□□□□□ -2.14
NEFMP07197 RNU6-1260P-201ENST00000362944 107 ntBASIC1.68□□□□□ -2.14
NEFMP07197 RNU6-957P-201ENST00000363652 99 ntBASIC1.68□□□□□ -2.14
NEFMP07197 SNORA80D-201ENST00000384488 135 ntBASIC1.68□□□□□ -2.14
NEFMP07197 RPS26P5-201ENST00000418544 335 ntBASIC1.68□□□□□ -2.14
NEFMP07197 AC092628.1-201ENST00000436250 252 ntBASIC1.68□□□□□ -2.14
NEFMP07197 RNU7-195P-201ENST00000458793 62 ntBASIC1.68□□□□□ -2.14
NEFMP07197 AC004223.1-201ENST00000479840 271 ntBASIC1.68□□□□□ -2.14
NEFMP07197 Y_RNA.809-201ENST00000516058 95 ntBASIC1.68□□□□□ -2.14
NEFMP07197 SNORA18.5-201ENST00000516616 101 ntBASIC1.68□□□□□ -2.14
NEFMP07197 AC068338.1-201ENST00000565567 176 ntBASIC1.68□□□□□ -2.14
NEFMP07197 MIR3660-201ENST00000584845 100 ntBASIC1.68□□□□□ -2.14
NEFMP07197 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.68□□□□□ -2.14
NEFMP07197 SNORA63.2-201ENST00000362603 126 ntBASIC1.67□□□□□ -2.14
NEFMP07197 Y_RNA.42-201ENST00000362660 108 ntBASIC1.67□□□□□ -2.14
NEFMP07197 SNORA25.9-201ENST00000365087 128 ntBASIC1.67□□□□□ -2.14
NEFMP07197 Y_RNA.491-201ENST00000384417 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms