Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-573P-201ENST00000383938 106 ntBASIC1.24□□□□□ -2.21
HLA-DOAP06340 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
HLA-DOAP06340 AL078603.1-201ENST00000603824 313 ntBASIC1.24□□□□□ -2.21
HLA-DOAP06340 MIR6082-201ENST00000613604 109 ntBASIC1.24□□□□□ -2.21
HLA-DOAP06340 RNU4-58P-201ENST00000363192 141 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 Y_RNA.118-201ENST00000363300 101 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 SNORD116-10-201ENST00000363791 102 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 RNU6-219P-201ENST00000364728 107 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 RNA5SP173-201ENST00000364857 136 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 RNU6-994P-201ENST00000410507 111 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 RNU7-156P-201ENST00000517214 74 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
HLA-DOAP06340 Y_RNA.42-201ENST00000362660 108 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 SNORD100-201ENST00000408573 76 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 TRAJ51-201ENST00000504127 63 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 SNORA72.7-201ENST00000516349 94 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 MIR4668-201ENST00000582284 70 ntBASIC1.22□□□□□ -2.21
HLA-DOAP06340 Y_RNA.96-201ENST00000363092 109 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 SNORD115-27-201ENST00000364430 82 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 MIR450A2-201ENST00000385022 100 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HLA-DOAP06340 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 AL161932.1-201ENST00000437408 146 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 RNU7-102P-201ENST00000458948 62 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 snoU13.11-201ENST00000459219 104 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 RN7SKP12-201ENST00000516275 143 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
HLA-DOAP06340 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HLA-DOAP06340 RNU6-1125P-201ENST00000363601 107 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 RNA5SP245-201ENST00000364239 121 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 RNU6-571P-201ENST00000384128 107 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 RNU6-480P-201ENST00000384332 107 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 MIR1302-4-201ENST00000408701 150 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 SNORD63B-201ENST00000411005 70 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 Y_RNA.620-201ENST00000411009 88 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 snoU13.18-201ENST00000459483 104 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 RNA5SP220-201ENST00000516298 104 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 MIR4804-201ENST00000581683 73 ntBASIC1.2□□□□□ -2.22
HLA-DOAP06340 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HLA-DOAP06340 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 SNORD116-22-201ENST00000384430 92 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 MIR100-201ENST00000385259 80 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 RNU7-195P-201ENST00000458793 62 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 RNU7-85P-201ENST00000458851 63 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 RNU6-1194P-201ENST00000516208 104 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 RNU6-977P-201ENST00000516411 103 ntBASIC1.19□□□□□ -2.22
HLA-DOAP06340 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
HLA-DOAP06340 MIR101-2-201ENST00000362195 79 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 RNY1P1-201ENST00000364372 112 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 RNU6-675P-201ENST00000384236 104 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 RNU6-364P-201ENST00000384387 107 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 Y_RNA.536-201ENST00000384621 113 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 SNORD12-201ENST00000391002 90 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 RNU7-56P-201ENST00000458744 62 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 AC022137.1-201ENST00000483735 151 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 SNORD92-201ENST00000585078 85 ntBASIC1.18□□□□□ -2.22
HLA-DOAP06340 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
HLA-DOAP06340 RNU6-42P-201ENST00000384165 107 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 MIR520F-201ENST00000384824 87 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 MIR938-201ENST00000401216 83 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 AL606490.4-201ENST00000423117 127 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 AC092628.1-201ENST00000436250 252 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 Y_RNA.697-201ENST00000516776 113 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 IGLL4P-201ENST00000614590 133 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 MIR7111-201ENST00000619751 72 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 MIR6734-201ENST00000621166 68 ntBASIC1.17□□□□□ -2.22
HLA-DOAP06340 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
HLA-DOAP06340 RNU6-291P-201ENST00000384720 107 ntBASIC1.16□□□□□ -2.22
HLA-DOAP06340 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
HLA-DOAP06340 RNU6-448P-201ENST00000517052 107 ntBASIC1.16□□□□□ -2.22
HLA-DOAP06340 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
HLA-DOAP06340 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.16□□□□□ -2.22
HLA-DOAP06340 MIR1-1-201ENST00000362147 71 ntBASIC1.15□□□□□ -2.23
HLA-DOAP06340 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
HLA-DOAP06340 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
HLA-DOAP06340 RNU6-519P-201ENST00000410590 108 ntBASIC1.15□□□□□ -2.23
HLA-DOAP06340 RMST_2.1-201ENST00000617263 136 ntBASIC1.15□□□□□ -2.23
HLA-DOAP06340 MIR1245B-201ENST00000636115 69 ntBASIC1.15□□□□□ -2.23
HLA-DOAP06340 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DOAP06340 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DOAP06340 RNU6-957P-201ENST00000363652 99 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 RNU6-820P-201ENST00000384273 107 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 RNU6-1152P-201ENST00000384576 107 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 RNU6-535P-201ENST00000384722 107 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 MIR635-201ENST00000384830 98 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 Y_RNA.611-201ENST00000410682 108 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 SNORD4B-201ENST00000459083 72 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 RNU7-153P-201ENST00000516455 62 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 331.7 ms