Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
PDGFBP01127 AC087741.2-201ENST00000619415 172 ntBASIC0.14□□□□□ -2.39
PDGFBP01127 MIR6828-201ENST00000636181 60 ntBASIC0.14□□□□□ -2.39
PDGFBP01127 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
PDGFBP01127 Y_RNA.185-201ENST00000363894 100 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 RNA5SP331-201ENST00000364986 107 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 MIR34C-201ENST00000384831 77 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 MIR599-201ENST00000385069 95 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 RNU6-781P-201ENST00000516377 101 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 RNU6-426P-201ENST00000516464 97 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 FTX_2.1-201ENST00000618816 94 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 MIR1255B1-201ENST00000636325 63 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
PDGFBP01127 Y_RNA.488-201ENST00000384403 102 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 Y_RNA.528-201ENST00000384575 108 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 MIR569-201ENST00000385228 96 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 RNU6-735P-201ENST00000410612 107 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 Z95118.1-201ENST00000421372 247 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 RNU7-195P-201ENST00000458793 62 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 MIR3163-201ENST00000581592 73 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.12□□□□□ -2.39
PDGFBP01127 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
PDGFBP01127 Y_RNA.127-201ENST00000363386 109 ntBASIC0.11□□□□□ -2.39
PDGFBP01127 RNU6-647P-201ENST00000364243 107 ntBASIC0.11□□□□□ -2.39
PDGFBP01127 MTND5P40-201ENST00000559945 246 ntBASIC0.11□□□□□ -2.39
PDGFBP01127 MIR4493-201ENST00000584016 73 ntBASIC0.11□□□□□ -2.39
PDGFBP01127 RNU7-10P-201ENST00000607194 63 ntBASIC0.11□□□□□ -2.39
PDGFBP01127 Y_RNA.213-201ENST00000364178 111 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 RNU6-726P-201ENST00000364680 107 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 RNU6-30P-201ENST00000384561 107 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 SNORD63B-201ENST00000411005 70 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 AC244505.6-201ENST00000452829 130 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 RPL39P34-201ENST00000477141 156 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 RNU6-346P-201ENST00000516288 111 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 RNU6-758P-201ENST00000516292 89 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 AL512310.12-203ENST00000640543 90 ntBASIC0.1□□□□□ -2.39
PDGFBP01127 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
PDGFBP01127 AL158147.1-201ENST00000443970 75 ntBASIC0.09□□□□□ -2.4
PDGFBP01127 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
PDGFBP01127 SNORA70.25-201ENST00000612741 95 ntBASIC0.09□□□□□ -2.4
PDGFBP01127 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.09□□□□□ -2.4
PDGFBP01127 SNORD114-5-201ENST00000362928 70 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 Y_RNA.360-201ENST00000365512 102 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 RNU6-1126P-201ENST00000384002 107 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 RNU6-127P-201ENST00000390897 107 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 RNU7-106P-201ENST00000459514 67 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 Y_RNA.809-201ENST00000516058 95 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 U7.2-201ENST00000607576 63 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 AP001340.1-201ENST00000624405 217 ntBASIC0.08□□□□□ -2.4
PDGFBP01127 Y_RNA.198-201ENST00000364013 98 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 RNU6-524P-201ENST00000384270 107 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 MIR593-201ENST00000384856 100 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 MIR516A2-201ENST00000384888 90 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 MIR516A1-201ENST00000385033 90 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 RNU6-269P-201ENST00000391077 97 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 SPINT5P-201ENST00000448174 155 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 RNU6-1211P-201ENST00000459179 105 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 RNU6-1234P-201ENST00000516877 103 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 RNU6-850P-201ENST00000516934 103 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 AP001180.6-201ENST00000584918 159 ntBASIC0.07□□□□□ -2.4
PDGFBP01127 Y_RNA.155-201ENST00000363632 101 ntBASIC0.06□□□□□ -2.4
PDGFBP01127 RNA5SP128-201ENST00000365305 116 ntBASIC0.06□□□□□ -2.4
PDGFBP01127 RNU6-170P-201ENST00000362832 104 ntBASIC0.05□□□□□ -2.4
PDGFBP01127 RNA5SP98-201ENST00000363158 137 ntBASIC0.05□□□□□ -2.4
PDGFBP01127 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
PDGFBP01127 RNA5SP403-201ENST00000363598 108 ntBASIC0.05□□□□□ -2.4
PDGFBP01127 RNA5SP368-201ENST00000364298 116 ntBASIC0.05□□□□□ -2.4
PDGFBP01127 IGLVI-20-201ENST00000519296 130 ntBASIC0.05□□□□□ -2.4
PDGFBP01127 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 MIR548I2-201ENST00000408348 149 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 RNA5SP136-201ENST00000410906 107 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 MTND4LP9-201ENST00000427694 174 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 AC097635.1-201ENST00000450678 155 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 RNU6-1265P-201ENST00000516342 103 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 AC025166.1-201ENST00000612411 163 ntBASIC0.04□□□□□ -2.4
PDGFBP01127 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 SNORD38.2-201ENST00000384470 69 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 MIR548D2-201ENST00000384955 97 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 RNU7-200P-201ENST00000516105 62 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 RNU7-13P-201ENST00000516413 62 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 RNU6-255P-201ENST00000516957 105 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 NAMPTP3-201ENST00000569273 224 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 RNU1-29P-201ENST00000606574 126 ntBASIC0.03□□□□□ -2.4
PDGFBP01127 MTND5P18-201ENST00000445624 1801 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 SNORD115-19-201ENST00000363098 82 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 SNORD115-18-201ENST00000363293 82 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 SNORD95.1-201ENST00000364099 68 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 SNORD115-17-201ENST00000364612 82 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 SNORD114-15-201ENST00000364687 72 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 Y_RNA.342-201ENST00000365352 113 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 Y_RNA.343-201ENST00000365354 112 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 Y_RNA.344-201ENST00000365381 112 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 AL161932.1-201ENST00000437408 146 ntBASIC0.02□□□□□ -2.41
PDGFBP01127 MIR409-201ENST00000362237 79 ntBASIC0.01□□□□□ -2.41
PDGFBP01127 Y_RNA.247-201ENST00000364500 92 ntBASIC0.01□□□□□ -2.41
PDGFBP01127 RNU6-571P-201ENST00000384128 107 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 275.2 ms