Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MIR34C-201ENST00000384831 77 ntBASIC0.09□□□□□ -2.4
DDX58O95786 AC097635.1-201ENST00000450678 155 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 MTND5P40-201ENST00000559945 246 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-170P-201ENST00000362832 104 ntBASIC0.08□□□□□ -2.4
DDX58O95786 Y_RNA.528-201ENST00000384575 108 ntBASIC0.08□□□□□ -2.4
DDX58O95786 SNORD63B-201ENST00000411005 70 ntBASIC0.08□□□□□ -2.4
DDX58O95786 AC108059.2-201ENST00000434626 151 ntBASIC0.08□□□□□ -2.4
DDX58O95786 RNU7-195P-201ENST00000458793 62 ntBASIC0.08□□□□□ -2.4
DDX58O95786 RPL39P34-201ENST00000477141 156 ntBASIC0.08□□□□□ -2.4
DDX58O95786 Y_RNA.809-201ENST00000516058 95 ntBASIC0.08□□□□□ -2.4
DDX58O95786 MIR499B-201ENST00000636498 73 ntBASIC0.08□□□□□ -2.4
DDX58O95786 SNORD115-19-201ENST00000363098 82 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORD115-18-201ENST00000363293 82 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNA5SP403-201ENST00000363598 108 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORD115-17-201ENST00000364612 82 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNA5SP128-201ENST00000365305 116 ntBASIC0.07□□□□□ -2.4
DDX58O95786 MIR643-201ENST00000385267 97 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORA7.5-201ENST00000410672 110 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6-426P-201ENST00000516464 97 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6-1061P-201ENST00000516530 99 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNA5SP395-201ENST00000516567 118 ntBASIC0.07□□□□□ -2.4
DDX58O95786 MIR1255B1-201ENST00000636325 63 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6-235P-201ENST00000362644 107 ntBASIC0.06□□□□□ -2.4
DDX58O95786 RNU6-781P-201ENST00000516377 101 ntBASIC0.06□□□□□ -2.4
DDX58O95786 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
DDX58O95786 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
DDX58O95786 AL162376.1-201ENST00000624117 175 ntBASIC0.06□□□□□ -2.4
DDX58O95786 AL512310.12-203ENST00000640543 90 ntBASIC0.06□□□□□ -2.4
DDX58O95786 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-571P-201ENST00000384128 107 ntBASIC0.05□□□□□ -2.4
DDX58O95786 MIR329-2-201ENST00000385029 84 ntBASIC0.05□□□□□ -2.4
DDX58O95786 MIR610-201ENST00000385139 96 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-127P-201ENST00000390897 107 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-1265P-201ENST00000516342 103 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-850P-201ENST00000516934 103 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-794P-201ENST00000517261 64 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-35P-201ENST00000384530 107 ntBASIC0.04□□□□□ -2.4
DDX58O95786 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
DDX58O95786 RNU6-1232P-201ENST00000516299 86 ntBASIC0.04□□□□□ -2.4
DDX58O95786 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
DDX58O95786 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
DDX58O95786 Y_RNA.343-201ENST00000365354 112 ntBASIC0.03□□□□□ -2.4
DDX58O95786 RNU6-524P-201ENST00000384270 107 ntBASIC0.03□□□□□ -2.4
DDX58O95786 Y_RNA.555-201ENST00000384673 110 ntBASIC0.03□□□□□ -2.4
DDX58O95786 MIR548D2-201ENST00000384955 97 ntBASIC0.03□□□□□ -2.4
DDX58O95786 RNU6-269P-201ENST00000391077 97 ntBASIC0.03□□□□□ -2.4
DDX58O95786 RNU6-735P-201ENST00000410612 107 ntBASIC0.03□□□□□ -2.4
DDX58O95786 MIR5706-201ENST00000579841 80 ntBASIC0.03□□□□□ -2.4
DDX58O95786 MIR6759-201ENST00000638110 65 ntBASIC0.03□□□□□ -2.4
DDX58O95786 Y_RNA.342-201ENST00000365352 113 ntBASIC0.02□□□□□ -2.41
DDX58O95786 SPINT5P-201ENST00000448174 155 ntBASIC0.02□□□□□ -2.41
DDX58O95786 RNU7-13P-201ENST00000516413 62 ntBASIC0.02□□□□□ -2.41
DDX58O95786 U7.6-201ENST00000610841 64 ntBASIC0.02□□□□□ -2.41
DDX58O95786 AC025166.1-201ENST00000612411 163 ntBASIC0.02□□□□□ -2.41
DDX58O95786 SNORA70.25-201ENST00000612741 95 ntBASIC0.02□□□□□ -2.41
DDX58O95786 Y_RNA.170-201ENST00000363746 110 ntBASIC0.01□□□□□ -2.41
DDX58O95786 SNORD41.1-201ENST00000391000 69 ntBASIC0.01□□□□□ -2.41
DDX58O95786 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.01□□□□□ -2.41
DDX58O95786 RNU7-106P-201ENST00000459514 67 ntBASIC0.01□□□□□ -2.41
DDX58O95786 RNU6-1234P-201ENST00000516877 103 ntBASIC0.01□□□□□ -2.41
DDX58O95786 AC073869.9-201ENST00000641610 120 ntBASIC0.01□□□□□ -2.41
DDX58O95786 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
DDX58O95786 RNU6-1260P-201ENST00000362944 107 ntBASIC0□□□□□ -2.41
DDX58O95786 Y_RNA.155-201ENST00000363632 101 ntBASIC0□□□□□ -2.41
DDX58O95786 RNY4P6-201ENST00000363667 96 ntBASIC0□□□□□ -2.41
DDX58O95786 MIR519A1-201ENST00000385257 85 ntBASIC0□□□□□ -2.41
DDX58O95786 RNU7-200P-201ENST00000516105 62 ntBASIC0□□□□□ -2.41
DDX58O95786 RNU1-29P-201ENST00000606574 126 ntBASIC0□□□□□ -2.41
DDX58O95786 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0□□□□□ -2.41
DDX58O95786 RNU6-652P-201ENST00000365488 107 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR593-201ENST00000384856 100 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR516A2-201ENST00000384888 90 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR516A1-201ENST00000385033 90 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 SNORA40-201ENST00000388090 126 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 RNU6-509P-201ENST00000363519 107 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 RNU6-409P-201ENST00000384114 104 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 MTND4LP9-201ENST00000427694 174 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 MTND5P18-201ENST00000445624 1801 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 RNU6-363P-201ENST00000362895 105 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 AC006210.1-201ENST00000424882 111 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 SNORD58C-201ENST00000365223 64 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 SNORD110-201ENST00000408189 75 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 RNU7-74P-201ENST00000459104 62 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 RNA5SP476-201ENST00000516613 103 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms