Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.12□□□□□ -2.43
SIX3O95343 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.12□□□□□ -2.43
SIX3O95343 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 RNY4P6-201ENST00000363667 96 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 MIR206-201ENST00000384872 86 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 MIR599-201ENST00000385069 95 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 MIR5706-201ENST00000579841 80 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 AC072026.1-201ENST00000605023 201 ntBASIC-0.13□□□□□ -2.43
SIX3O95343 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.13□□□□□ -2.43
SIX3O95343 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 RNU6-574P-201ENST00000384265 107 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 RNU6-929P-201ENST00000384429 107 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 RNU7-161P-201ENST00000517289 62 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 AP002392.1-201ENST00000537692 208 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 AC130289.1-201ENST00000577321 73 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 MIR3681-201ENST00000580089 72 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 AC009779.6-201ENST00000603972 165 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 AP001362.1-201ENST00000625165 124 ntBASIC-0.14□□□□□ -2.43
SIX3O95343 BX276092.1-201ENST00000427368 251 ntBASIC-0.15□□□□□ -2.43
SIX3O95343 AL137067.1-201ENST00000615933 120 ntBASIC-0.15□□□□□ -2.43
SIX3O95343 AC073869.9-201ENST00000641610 120 ntBASIC-0.15□□□□□ -2.43
SIX3O95343 MIR106A-201ENST00000384870 81 ntBASIC-0.16□□□□□ -2.44
SIX3O95343 RNU7-2P-201ENST00000516096 62 ntBASIC-0.16□□□□□ -2.44
SIX3O95343 AP001328.1-201ENST00000528550 176 ntBASIC-0.16□□□□□ -2.44
SIX3O95343 MIR3658-201ENST00000636291 56 ntBASIC-0.16□□□□□ -2.44
SIX3O95343 RNY4P27-201ENST00000363341 96 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 RNU4-84P-201ENST00000364200 139 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 RNU6-309P-201ENST00000364573 106 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 AC097635.1-201ENST00000450678 155 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 RNU7-159P-201ENST00000459284 62 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 RNY4P20-201ENST00000516678 93 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 RNU2-60P-201ENST00000517290 128 ntBASIC-0.17□□□□□ -2.44
SIX3O95343 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 AL603914.1-201ENST00000401964 204 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 RNA5SP163-201ENST00000410304 99 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 AC108059.2-201ENST00000434626 151 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 TRAJ51-201ENST00000504127 63 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.18□□□□□ -2.44
SIX3O95343 MIR4743-201ENST00000584576 69 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.18□□□□□ -2.44
SIX3O95343 SNORA70.25-201ENST00000612741 95 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 AL162376.1-201ENST00000624117 175 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
SIX3O95343 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.19□□□□□ -2.44
SIX3O95343 RNU6-449P-201ENST00000383914 107 ntBASIC-0.19□□□□□ -2.44
SIX3O95343 MIR548I2-201ENST00000408348 149 ntBASIC-0.19□□□□□ -2.44
SIX3O95343 AC006210.1-201ENST00000424882 111 ntBASIC-0.19□□□□□ -2.44
SIX3O95343 MIR1270-201ENST00000459320 83 ntBASIC-0.19□□□□□ -2.44
SIX3O95343 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.19□□□□□ -2.44
SIX3O95343 RNU6-508P-201ENST00000363231 103 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 RNU6-509P-201ENST00000363519 107 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 RNA5SP403-201ENST00000363598 108 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 RNY4P7-201ENST00000364600 96 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 RNU6-463P-201ENST00000384340 107 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 SNORA32.3-201ENST00000384772 121 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 MIR759-201ENST00000390224 91 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 RNU6-269P-201ENST00000391077 97 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 SNORD75.1-201ENST00000408373 60 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.2□□□□□ -2.44
SIX3O95343 MIR4441-201ENST00000582623 100 ntBASIC-0.2□□□□□ -2.44
SIX3O95343 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.21□□□□□ -2.44
SIX3O95343 RNU6-616P-201ENST00000384353 107 ntBASIC-0.21□□□□□ -2.44
SIX3O95343 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.21□□□□□ -2.44
SIX3O95343 RNU7-6P-201ENST00000516845 62 ntBASIC-0.21□□□□□ -2.44
SIX3O95343 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
SIX3O95343 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 RNU6-10P-201ENST00000384036 107 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 MIR501-201ENST00000390204 84 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 SNORD110-201ENST00000408189 75 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 RNU7-13P-201ENST00000516413 62 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
SIX3O95343 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNA5SP275-201ENST00000363936 118 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 SNORD115-35-201ENST00000365122 82 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNU4-11P-201ENST00000365287 132 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 SNORD38.2-201ENST00000384470 69 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 SNORD41.1-201ENST00000391000 69 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 SNORD63B-201ENST00000411005 70 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNU7-195P-201ENST00000458793 62 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNU7-121P-201ENST00000516604 62 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 AL670379.3-201ENST00000605040 251 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNU1-29P-201ENST00000606574 126 ntBASIC-0.23□□□□□ -2.45
SIX3O95343 RNU6-170P-201ENST00000362832 104 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 MIR548H2-201ENST00000408874 88 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 RNU7-74P-201ENST00000459104 62 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 MIR548AZ-201ENST00000616567 95 ntBASIC-0.24□□□□□ -2.45
SIX3O95343 RNU6-756P-201ENST00000383997 107 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms