Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-1163P-201ENST00000364516 107 ntBASIC0.98□□□□□ -2.25
VPS4BO75351 SNORD45B-201ENST00000364617 72 ntBASIC0.98□□□□□ -2.25
VPS4BO75351 MIR520H-201ENST00000385126 88 ntBASIC0.98□□□□□ -2.25
VPS4BO75351 SNORD100-201ENST00000408573 76 ntBASIC0.98□□□□□ -2.25
VPS4BO75351 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS4BO75351 RNU6-158P-201ENST00000517104 100 ntBASIC0.98□□□□□ -2.25
VPS4BO75351 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS4BO75351 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
VPS4BO75351 MIR450A1-201ENST00000362262 91 ntBASIC0.97□□□□□ -2.25
VPS4BO75351 Y_RNA.536-201ENST00000384621 113 ntBASIC0.97□□□□□ -2.25
VPS4BO75351 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
VPS4BO75351 RNU6-170P-201ENST00000362832 104 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 Y_RNA.95-201ENST00000363079 95 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VPS4BO75351 Y_RNA.544-201ENST00000384650 113 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 RNU6-291P-201ENST00000384720 107 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 MIR519A1-201ENST00000385257 85 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 BX276092.1-201ENST00000427368 251 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 RNU6-850P-201ENST00000516934 103 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 MIR4777-201ENST00000583710 86 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS4BO75351 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 AC091304.10-201ENST00000641554 121 ntBASIC0.96□□□□□ -2.26
VPS4BO75351 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS4BO75351 Y_RNA.93-201ENST00000363066 109 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 MIR193B-201ENST00000384907 83 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 SPINT5P-201ENST00000448174 155 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 Y_RNA.697-201ENST00000516776 113 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 MTND5P40-201ENST00000559945 246 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 MIR548H5-201ENST00000580314 60 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 AL353765.1-201ENST00000605514 183 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 uc_338.16-201ENST00000621804 95 ntBASIC0.95□□□□□ -2.26
VPS4BO75351 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS4BO75351 MIR101-2-201ENST00000362195 79 ntBASIC0.94□□□□□ -2.26
VPS4BO75351 Y_RNA.567-201ENST00000384736 106 ntBASIC0.94□□□□□ -2.26
VPS4BO75351 AC109327.2-201ENST00000448339 378 ntBASIC0.94□□□□□ -2.26
VPS4BO75351 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS4BO75351 Y_RNA.659-201ENST00000515994 113 ntBASIC0.94□□□□□ -2.26
VPS4BO75351 RNU7-10P-201ENST00000607194 63 ntBASIC0.94□□□□□ -2.26
VPS4BO75351 AC012531.4-201ENST00000616509 177 ntBASIC0.94□□□□□ -2.26
VPS4BO75351 Y_RNA.30-201ENST00000362572 97 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-1244P-201ENST00000363614 108 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 Y_RNA.342-201ENST00000365352 113 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-32P-201ENST00000383948 107 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-13P-201ENST00000384248 107 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-12P-201ENST00000384604 107 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-41P-201ENST00000384741 107 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 SNORD99-201ENST00000408612 74 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 AC244098.3-201ENST00000424803 96 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-109P-201ENST00000516364 107 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 RNU6-184P-201ENST00000516514 107 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 AP001318.4-201ENST00000616637 121 ntBASIC0.93□□□□□ -2.26
VPS4BO75351 Y_RNA.174-201ENST00000363781 105 ntBASIC0.92□□□□□ -2.26
VPS4BO75351 RNU6-535P-201ENST00000384722 107 ntBASIC0.92□□□□□ -2.26
VPS4BO75351 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
VPS4BO75351 AC092628.1-201ENST00000436250 252 ntBASIC0.92□□□□□ -2.26
VPS4BO75351 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
VPS4BO75351 Y_RNA.495-201ENST00000384435 112 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 RNU6-813P-201ENST00000384691 107 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 MIR635-201ENST00000384830 98 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 TRAJ51-201ENST00000504127 63 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 RNU6-795P-201ENST00000516323 103 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 MIR1273G-201ENST00000577677 100 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 MIR548Z-201ENST00000584743 97 ntBASIC0.91□□□□□ -2.26
VPS4BO75351 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 Y_RNA.32-201ENST00000362589 110 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 RNA5SP245-201ENST00000364239 121 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 Y_RNA.348-201ENST00000365403 103 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 MTATP8P2-201ENST00000435212 202 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 AC244505.6-201ENST00000452829 130 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 SNORA31.14-201ENST00000516728 116 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 AC138907.6-201ENST00000568401 126 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 AC138869.1-201ENST00000568623 124 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 MIR3612-201ENST00000579753 87 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 AL590095.2-201ENST00000604136 117 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.9□□□□□ -2.27
VPS4BO75351 Y_RNA.107-201ENST00000363190 121 ntBASIC0.89□□□□□ -2.27
VPS4BO75351 Y_RNA.467-201ENST00000384297 102 ntBASIC0.89□□□□□ -2.27
VPS4BO75351 SNORD63B-201ENST00000411005 70 ntBASIC0.89□□□□□ -2.27
VPS4BO75351 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS4BO75351 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS4BO75351 RNU6-86P-201ENST00000606534 107 ntBASIC0.89□□□□□ -2.27
VPS4BO75351 Y_RNA.96-201ENST00000363092 109 ntBASIC0.88□□□□□ -2.27
VPS4BO75351 RNU6-1125P-201ENST00000363601 107 ntBASIC0.88□□□□□ -2.27
VPS4BO75351 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
VPS4BO75351 RNU6-480P-201ENST00000384332 107 ntBASIC0.88□□□□□ -2.27
VPS4BO75351 RNU7-106P-201ENST00000459514 67 ntBASIC0.88□□□□□ -2.27
VPS4BO75351 MIR2052-201ENST00000636055 55 ntBASIC0.88□□□□□ -2.27
VPS4BO75351 RNU6-1260P-201ENST00000362944 107 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 RNA5SP117-201ENST00000365294 118 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 MTATP6P29-201ENST00000415057 132 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 AC097635.1-201ENST00000450678 155 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms