Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORD83.1-201ENST00000411362 77 ntBASIC2.49□□□□□ -2.01
RNF40O75150 AL356320.1-201ENST00000429616 163 ntBASIC2.49□□□□□ -2.01
RNF40O75150 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
RNF40O75150 AL645939.4-201ENST00000604495 135 ntBASIC2.49□□□□□ -2.01
RNF40O75150 MIR4773-1-201ENST00000637203 78 ntBASIC2.49□□□□□ -2.01
RNF40O75150 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF40O75150 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF40O75150 MIR125B2-201ENST00000385128 89 ntBASIC2.48□□□□□ -2.01
RNF40O75150 AC244098.3-201ENST00000424803 96 ntBASIC2.48□□□□□ -2.01
RNF40O75150 AC244505.6-201ENST00000452829 130 ntBASIC2.48□□□□□ -2.01
RNF40O75150 AC046143.2-201ENST00000609789 160 ntBASIC2.48□□□□□ -2.01
RNF40O75150 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RNF40O75150 RNU6-614P-201ENST00000384369 107 ntBASIC2.47□□□□□ -2.01
RNF40O75150 RNA5SP212-201ENST00000391223 107 ntBASIC2.47□□□□□ -2.01
RNF40O75150 AC245884.12-201ENST00000615364 59 ntBASIC2.47□□□□□ -2.01
RNF40O75150 U6.59-201ENST00000615686 107 ntBASIC2.47□□□□□ -2.01
RNF40O75150 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.47□□□□□ -2.01
RNF40O75150 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RNF40O75150 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF40O75150 RNA5SP276-201ENST00000362580 94 ntBASIC2.46□□□□□ -2.02
RNF40O75150 AC104435.1-201ENST00000483483 166 ntBASIC2.46□□□□□ -2.02
RNF40O75150 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.46□□□□□ -2.02
RNF40O75150 RNU6-982P-201ENST00000516216 102 ntBASIC2.46□□□□□ -2.02
RNF40O75150 RNU6-287P-201ENST00000516230 98 ntBASIC2.46□□□□□ -2.02
RNF40O75150 RNU6-165P-201ENST00000517170 99 ntBASIC2.46□□□□□ -2.02
RNF40O75150 MIR1273D-201ENST00000577266 86 ntBASIC2.46□□□□□ -2.02
RNF40O75150 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.46□□□□□ -2.02
RNF40O75150 MIR524-201ENST00000385242 87 ntBASIC2.45□□□□□ -2.02
RNF40O75150 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RNF40O75150 RPL23AP42-201ENST00000471152 471 ntBASIC2.45□□□□□ -2.02
RNF40O75150 AP000553.5-201ENST00000641933 54 ntBASIC2.45□□□□□ -2.02
RNF40O75150 AL359851.1-201ENST00000569460 4997 ntBASIC2.44□□□□□ -2.02
RNF40O75150 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
RNF40O75150 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RNF40O75150 MIR1289-2-201ENST00000408360 111 ntBASIC2.44□□□□□ -2.02
RNF40O75150 SNORD75.2-201ENST00000408784 58 ntBASIC2.44□□□□□ -2.02
RNF40O75150 MIR3920-201ENST00000581751 86 ntBASIC2.44□□□□□ -2.02
RNF40O75150 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
RNF40O75150 RNU6-829P-201ENST00000363700 112 ntBASIC2.43□□□□□ -2.02
RNF40O75150 RNU7-24P-201ENST00000458867 62 ntBASIC2.43□□□□□ -2.02
RNF40O75150 AC079804.2-201ENST00000490376 200 ntBASIC2.43□□□□□ -2.02
RNF40O75150 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
RNF40O75150 snoU13.23-201ENST00000458863 104 ntBASIC2.42□□□□□ -2.02
RNF40O75150 AC036111.3-201ENST00000526389 112 ntBASIC2.42□□□□□ -2.02
RNF40O75150 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RNF40O75150 Y_RNA.236-201ENST00000364427 111 ntBASIC2.41□□□□□ -2.02
RNF40O75150 RNU6-934P-201ENST00000365154 107 ntBASIC2.41□□□□□ -2.02
RNF40O75150 SNORD115-44-201ENST00000365391 82 ntBASIC2.41□□□□□ -2.02
RNF40O75150 RNU6-535P-201ENST00000384722 107 ntBASIC2.41□□□□□ -2.02
RNF40O75150 SNORD23.1-201ENST00000408212 104 ntBASIC2.41□□□□□ -2.02
RNF40O75150 MIR4771-2-201ENST00000577758 74 ntBASIC2.41□□□□□ -2.02
RNF40O75150 MIR4771-1-201ENST00000582617 74 ntBASIC2.41□□□□□ -2.02
RNF40O75150 MIR8074-201ENST00000615081 81 ntBASIC2.41□□□□□ -2.02
RNF40O75150 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
RNF40O75150 SNORD113.3-201ENST00000364630 78 ntBASIC2.4□□□□□ -2.03
RNF40O75150 SNORA16B-201ENST00000364674 135 ntBASIC2.4□□□□□ -2.03
RNF40O75150 RNA5SP37-201ENST00000365420 130 ntBASIC2.4□□□□□ -2.03
RNF40O75150 Y_RNA.375-201ENST00000365625 101 ntBASIC2.4□□□□□ -2.03
RNF40O75150 MIR764-201ENST00000390811 85 ntBASIC2.4□□□□□ -2.03
RNF40O75150 RNU6-1057P-201ENST00000517162 102 ntBASIC2.4□□□□□ -2.03
RNF40O75150 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.4□□□□□ -2.03
RNF40O75150 MIR548AG2-201ENST00000581228 64 ntBASIC2.4□□□□□ -2.03
RNF40O75150 AL078603.1-201ENST00000603824 313 ntBASIC2.4□□□□□ -2.03
RNF40O75150 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RNF40O75150 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
RNF40O75150 RNA5SP338-201ENST00000410495 85 ntBASIC2.39□□□□□ -2.03
RNF40O75150 AL591806.2-201ENST00000433122 173 ntBASIC2.39□□□□□ -2.03
RNF40O75150 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF40O75150 RNU6-717P-201ENST00000459076 104 ntBASIC2.39□□□□□ -2.03
RNF40O75150 MIR4713-201ENST00000582691 75 ntBASIC2.39□□□□□ -2.03
RNF40O75150 AC008608.1-201ENST00000603910 127 ntBASIC2.39□□□□□ -2.03
RNF40O75150 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.39□□□□□ -2.03
RNF40O75150 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
RNF40O75150 AL773524.1-201ENST00000614065 229 ntBASIC2.39□□□□□ -2.03
RNF40O75150 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RNF40O75150 SNORD114-1-201ENST00000362705 72 ntBASIC2.38□□□□□ -2.03
RNF40O75150 RNU6-495P-201ENST00000362995 107 ntBASIC2.38□□□□□ -2.03
RNF40O75150 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.38□□□□□ -2.03
RNF40O75150 AC108210.2-201ENST00000503681 201 ntBASIC2.38□□□□□ -2.03
RNF40O75150 MIR3664-201ENST00000579074 99 ntBASIC2.38□□□□□ -2.03
RNF40O75150 AC103810.8-201ENST00000607347 118 ntBASIC2.38□□□□□ -2.03
RNF40O75150 RNU6-369P-201ENST00000362515 102 ntBASIC2.37□□□□□ -2.03
RNF40O75150 RNU6-1126P-201ENST00000384002 107 ntBASIC2.37□□□□□ -2.03
RNF40O75150 AC015712.3-201ENST00000559380 164 ntBASIC2.37□□□□□ -2.03
RNF40O75150 MIR4676-201ENST00000583078 72 ntBASIC2.37□□□□□ -2.03
RNF40O75150 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF40O75150 AC073869.9-201ENST00000641610 120 ntBASIC2.37□□□□□ -2.03
RNF40O75150 RNU6-1039P-201ENST00000383931 107 ntBASIC2.36□□□□□ -2.03
RNF40O75150 AL691482.2-201ENST00000457453 84 ntBASIC2.36□□□□□ -2.03
RNF40O75150 RNU7-40P-201ENST00000516397 64 ntBASIC2.36□□□□□ -2.03
RNF40O75150 RNU6-542P-201ENST00000516405 103 ntBASIC2.36□□□□□ -2.03
RNF40O75150 AC092634.7-201ENST00000621022 103 ntBASIC2.36□□□□□ -2.03
RNF40O75150 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
RNF40O75150 SNORA75.2-201ENST00000391138 150 ntBASIC2.35□□□□□ -2.03
RNF40O75150 SNORA75.3-201ENST00000391231 150 ntBASIC2.35□□□□□ -2.03
RNF40O75150 MIR8063-201ENST00000621930 81 ntBASIC2.35□□□□□ -2.03
RNF40O75150 RNA5SP403-201ENST00000363598 108 ntBASIC2.34□□□□□ -2.03
RNF40O75150 RPS26P5-201ENST00000418544 335 ntBASIC2.34□□□□□ -2.03
RNF40O75150 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
RNF40O75150 SNORD1A-201ENST00000364968 72 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms