Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RNU1-29P-201ENST00000606574 126 ntBASIC0.06□□□□□ -2.4
TRAF3IP2O43734 AC073869.9-201ENST00000641610 120 ntBASIC0.06□□□□□ -2.4
TRAF3IP2O43734 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
TRAF3IP2O43734 Y_RNA.180-201ENST00000363867 113 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 Y_RNA.360-201ENST00000365512 102 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 SNORD38.2-201ENST00000384470 69 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 MIR760-201ENST00000390220 80 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 MIR548L-201ENST00000408303 86 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 RNU7-104P-201ENST00000459398 79 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
TRAF3IP2O43734 Y_RNA.8-201ENST00000362353 102 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 RNU6-1260P-201ENST00000362944 107 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 MT-TI-201ENST00000387365 69 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 SNORD63B-201ENST00000411005 70 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 BX276092.1-201ENST00000427368 251 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 RNA5SP395-201ENST00000516567 118 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 U7.6-201ENST00000610841 64 ntBASIC0.04□□□□□ -2.4
TRAF3IP2O43734 Y_RNA.488-201ENST00000384403 102 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 MIR34C-201ENST00000384831 77 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 MIR548D2-201ENST00000384955 97 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 AC108059.2-201ENST00000434626 151 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 RNU6-521P-201ENST00000516663 105 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 Y_RNA.773-201ENST00000607168 90 ntBASIC0.03□□□□□ -2.4
TRAF3IP2O43734 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 RNU6-127P-201ENST00000390897 107 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 MIR892B-201ENST00000401279 77 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 RPL39P34-201ENST00000477141 156 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.809-201ENST00000516058 95 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 RNU6-782P-201ENST00000516852 104 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 MTND5P41-201ENST00000517498 206 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 AC021753.1-201ENST00000635724 168 ntBASIC0.02□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.323-201ENST00000365157 109 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.342-201ENST00000365352 113 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 RNY1P5-201ENST00000383890 115 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.528-201ENST00000384575 108 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 MIR1263-201ENST00000408324 86 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 RNU7-74P-201ENST00000459104 62 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 RNU7-200P-201ENST00000516105 62 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-1265P-201ENST00000516342 103 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-850P-201ENST00000516934 103 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 AC141557.1-201ENST00000540982 400 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 MIR4752-201ENST00000579672 72 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 MIR6759-201ENST00000638110 65 ntBASIC0.01□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.35-201ENST00000362601 101 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 RNU6-1313P-201ENST00000362622 102 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 RNU6-509P-201ENST00000363519 107 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.170-201ENST00000363746 110 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.221-201ENST00000364248 96 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.294-201ENST00000364916 102 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 RNU7-195P-201ENST00000458793 62 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 RNU6-426P-201ENST00000516464 97 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 RNU6-1018P-201ENST00000516577 106 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 MIR548AD-201ENST00000584780 82 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 AC090425.1-201ENST00000610007 140 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 uc_338.28-201ENST00000612082 187 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 MIR1255B1-201ENST00000636325 63 ntBASIC0□□□□□ -2.41
TRAF3IP2O43734 RNU6-363P-201ENST00000362895 105 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNY4P6-201ENST00000363667 96 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 SNORD58C-201ENST00000365223 64 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-269P-201ENST00000391077 97 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-781P-201ENST00000516377 101 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNU7-13P-201ENST00000516413 62 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
TRAF3IP2O43734 RNU6-161P-201ENST00000363051 106 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 SNORD115-44-201ENST00000365391 82 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 RNU6-652P-201ENST00000365488 107 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 MIR501-201ENST00000390204 84 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 RNU6-735P-201ENST00000410612 107 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 MIR3920-201ENST00000581751 86 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 AC025166.1-201ENST00000612411 163 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
TRAF3IP2O43734 SNORD38.1-201ENST00000363863 68 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 RNU6-524P-201ENST00000384270 107 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 SNORA40-201ENST00000388090 126 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 MTND4LP9-201ENST00000427694 174 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 MTND5P40-201ENST00000559945 246 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 SNORA70.25-201ENST00000612741 95 ntBASIC-0.03□□□□□ -2.41
TRAF3IP2O43734 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 RNU6-35P-201ENST00000384530 107 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 RNU7-106P-201ENST00000459514 67 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 MIR499B-201ENST00000636498 73 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
TRAF3IP2O43734 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms