Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU6-755P-201ENST00000364400 103 ntBASIC0.75□□□□□ -2.29
LDB2O43679 RNA5SP117-201ENST00000365294 118 ntBASIC0.75□□□□□ -2.29
LDB2O43679 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
LDB2O43679 MIR548G-201ENST00000408442 89 ntBASIC0.75□□□□□ -2.29
LDB2O43679 RNU6-554P-201ENST00000410466 106 ntBASIC0.75□□□□□ -2.29
LDB2O43679 BX276092.1-201ENST00000427368 251 ntBASIC0.75□□□□□ -2.29
LDB2O43679 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
LDB2O43679 MIR548H5-201ENST00000580314 60 ntBASIC0.75□□□□□ -2.29
LDB2O43679 RNU6-90P-201ENST00000606352 106 ntBASIC0.75□□□□□ -2.29
LDB2O43679 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
LDB2O43679 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LDB2O43679 SPINT5P-201ENST00000448174 155 ntBASIC0.74□□□□□ -2.29
LDB2O43679 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
LDB2O43679 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
LDB2O43679 uc_338.16-201ENST00000621804 95 ntBASIC0.74□□□□□ -2.29
LDB2O43679 RNU4-45P-201ENST00000365469 141 ntBASIC0.73□□□□□ -2.29
LDB2O43679 RNU6-1113P-201ENST00000384348 107 ntBASIC0.73□□□□□ -2.29
LDB2O43679 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
LDB2O43679 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.73□□□□□ -2.29
LDB2O43679 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
LDB2O43679 Y_RNA.659-201ENST00000515994 113 ntBASIC0.73□□□□□ -2.29
LDB2O43679 RNU6-904P-201ENST00000516206 101 ntBASIC0.73□□□□□ -2.29
LDB2O43679 RNU6-850P-201ENST00000516934 103 ntBASIC0.73□□□□□ -2.29
LDB2O43679 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.73□□□□□ -2.29
LDB2O43679 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
LDB2O43679 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
LDB2O43679 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.73□□□□□ -2.29
LDB2O43679 Y_RNA.32-201ENST00000362589 110 ntBASIC0.72□□□□□ -2.29
LDB2O43679 RNU6-170P-201ENST00000362832 104 ntBASIC0.72□□□□□ -2.29
LDB2O43679 Y_RNA.173-201ENST00000363776 113 ntBASIC0.72□□□□□ -2.29
LDB2O43679 SNORD45B-201ENST00000364617 72 ntBASIC0.72□□□□□ -2.29
LDB2O43679 MIR635-201ENST00000384830 98 ntBASIC0.72□□□□□ -2.29
LDB2O43679 Y_RNA.601-201ENST00000410500 113 ntBASIC0.72□□□□□ -2.29
LDB2O43679 SNORA31.14-201ENST00000516728 116 ntBASIC0.72□□□□□ -2.29
LDB2O43679 MIR3613-201ENST00000579844 87 ntBASIC0.72□□□□□ -2.29
LDB2O43679 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
LDB2O43679 MIR18A-201ENST00000362310 71 ntBASIC0.71□□□□□ -2.3
LDB2O43679 RNU6-766P-201ENST00000362478 107 ntBASIC0.71□□□□□ -2.3
LDB2O43679 RNU6-756P-201ENST00000383997 107 ntBASIC0.71□□□□□ -2.3
LDB2O43679 RNU6-44P-201ENST00000384045 107 ntBASIC0.71□□□□□ -2.3
LDB2O43679 SNORA51.5-201ENST00000384126 131 ntBASIC0.71□□□□□ -2.3
LDB2O43679 Y_RNA.466-201ENST00000384294 113 ntBASIC0.71□□□□□ -2.3
LDB2O43679 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
LDB2O43679 AL031737.1-201ENST00000450125 223 ntBASIC0.71□□□□□ -2.3
LDB2O43679 RNU6-135P-201ENST00000516769 101 ntBASIC0.71□□□□□ -2.3
LDB2O43679 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.71□□□□□ -2.3
LDB2O43679 AC138869.1-201ENST00000568623 124 ntBASIC0.71□□□□□ -2.3
LDB2O43679 MIR4439-201ENST00000583746 80 ntBASIC0.71□□□□□ -2.3
LDB2O43679 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
LDB2O43679 SNORA63.4-201ENST00000362763 126 ntBASIC0.7□□□□□ -2.3
LDB2O43679 Y_RNA.342-201ENST00000365352 113 ntBASIC0.7□□□□□ -2.3
LDB2O43679 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
LDB2O43679 SNORA19.1-201ENST00000410656 129 ntBASIC0.7□□□□□ -2.3
LDB2O43679 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
LDB2O43679 RNU6-469P-201ENST00000516253 101 ntBASIC0.7□□□□□ -2.3
LDB2O43679 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.7□□□□□ -2.3
LDB2O43679 RNA5SP245-201ENST00000364239 121 ntBASIC0.69□□□□□ -2.3
LDB2O43679 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
LDB2O43679 Y_RNA.567-201ENST00000384736 106 ntBASIC0.69□□□□□ -2.3
LDB2O43679 MIR519A1-201ENST00000385257 85 ntBASIC0.69□□□□□ -2.3
LDB2O43679 SNORD63B-201ENST00000411005 70 ntBASIC0.69□□□□□ -2.3
LDB2O43679 TRAJ51-201ENST00000504127 63 ntBASIC0.69□□□□□ -2.3
LDB2O43679 SCARNA23-201ENST00000516060 130 ntBASIC0.69□□□□□ -2.3
LDB2O43679 RNU6-537P-201ENST00000517277 103 ntBASIC0.69□□□□□ -2.3
LDB2O43679 Y_RNA.818-201ENST00000618813 71 ntBASIC0.69□□□□□ -2.3
LDB2O43679 Y_RNA.95-201ENST00000363079 95 ntBASIC0.68□□□□□ -2.3
LDB2O43679 RNU6-1163P-201ENST00000364516 107 ntBASIC0.68□□□□□ -2.3
LDB2O43679 MIR590-201ENST00000385008 97 ntBASIC0.68□□□□□ -2.3
LDB2O43679 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
LDB2O43679 AC109327.2-201ENST00000448339 378 ntBASIC0.68□□□□□ -2.3
LDB2O43679 AC097635.1-201ENST00000450678 155 ntBASIC0.68□□□□□ -2.3
LDB2O43679 AC244505.6-201ENST00000452829 130 ntBASIC0.68□□□□□ -2.3
LDB2O43679 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
LDB2O43679 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.68□□□□□ -2.3
LDB2O43679 Y_RNA.57-201ENST00000362806 113 ntBASIC0.67□□□□□ -2.3
LDB2O43679 RNU6-1244P-201ENST00000363614 108 ntBASIC0.67□□□□□ -2.3
LDB2O43679 MIR644A-201ENST00000385262 94 ntBASIC0.67□□□□□ -2.3
LDB2O43679 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
LDB2O43679 RNA5SP480-201ENST00000516840 109 ntBASIC0.67□□□□□ -2.3
LDB2O43679 MIR3678-201ENST00000578455 94 ntBASIC0.67□□□□□ -2.3
LDB2O43679 AC091304.10-201ENST00000641554 121 ntBASIC0.67□□□□□ -2.3
LDB2O43679 MIR450A1-201ENST00000362262 91 ntBASIC0.66□□□□□ -2.3
LDB2O43679 RNU6-1125P-201ENST00000363601 107 ntBASIC0.66□□□□□ -2.3
LDB2O43679 RNU6-480P-201ENST00000384332 107 ntBASIC0.66□□□□□ -2.3
LDB2O43679 Y_RNA.544-201ENST00000384650 113 ntBASIC0.65□□□□□ -2.31
LDB2O43679 RNU6-1254P-201ENST00000391266 104 ntBASIC0.65□□□□□ -2.31
LDB2O43679 RNU6-795P-201ENST00000516323 103 ntBASIC0.65□□□□□ -2.31
LDB2O43679 AC012531.4-201ENST00000616509 177 ntBASIC0.65□□□□□ -2.31
LDB2O43679 Y_RNA.36-201ENST00000362602 112 ntBASIC0.64□□□□□ -2.31
LDB2O43679 RNU6-1260P-201ENST00000362944 107 ntBASIC0.64□□□□□ -2.31
LDB2O43679 Y_RNA.81-201ENST00000362997 102 ntBASIC0.64□□□□□ -2.31
LDB2O43679 Y_RNA.96-201ENST00000363092 109 ntBASIC0.64□□□□□ -2.31
LDB2O43679 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
LDB2O43679 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
LDB2O43679 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
LDB2O43679 RNU6-813P-201ENST00000384691 107 ntBASIC0.64□□□□□ -2.31
LDB2O43679 MIR516A2-201ENST00000384888 90 ntBASIC0.64□□□□□ -2.31
LDB2O43679 MIR516A1-201ENST00000385033 90 ntBASIC0.64□□□□□ -2.31
LDB2O43679 MIR599-201ENST00000385069 95 ntBASIC0.64□□□□□ -2.31
LDB2O43679 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms