Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU7-156P-201ENST00000517214 74 ntBASIC1.17□□□□□ -2.22
PROM1O43490 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
PROM1O43490 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
PROM1O43490 Y_RNA.290-201ENST00000364879 114 ntBASIC1.16□□□□□ -2.22
PROM1O43490 Y_RNA.369-201ENST00000365568 117 ntBASIC1.16□□□□□ -2.22
PROM1O43490 MIR520E-201ENST00000384867 87 ntBASIC1.16□□□□□ -2.22
PROM1O43490 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.16□□□□□ -2.22
PROM1O43490 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
PROM1O43490 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.16□□□□□ -2.22
PROM1O43490 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
PROM1O43490 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
PROM1O43490 RNU6-1244P-201ENST00000363614 108 ntBASIC1.15□□□□□ -2.23
PROM1O43490 Y_RNA.173-201ENST00000363776 113 ntBASIC1.15□□□□□ -2.23
PROM1O43490 MIR938-201ENST00000401216 83 ntBASIC1.15□□□□□ -2.23
PROM1O43490 RNU6-850P-201ENST00000516934 103 ntBASIC1.15□□□□□ -2.23
PROM1O43490 AC013244.2-201ENST00000603396 103 ntBASIC1.15□□□□□ -2.23
PROM1O43490 MIR6082-201ENST00000613604 109 ntBASIC1.15□□□□□ -2.23
PROM1O43490 Y_RNA.57-201ENST00000362806 113 ntBASIC1.14□□□□□ -2.23
PROM1O43490 RNU6-1125P-201ENST00000363601 107 ntBASIC1.14□□□□□ -2.23
PROM1O43490 RNU6-480P-201ENST00000384332 107 ntBASIC1.14□□□□□ -2.23
PROM1O43490 RPS29P1-201ENST00000465274 159 ntBASIC1.14□□□□□ -2.23
PROM1O43490 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
PROM1O43490 RNU6-1194P-201ENST00000516208 104 ntBASIC1.14□□□□□ -2.23
PROM1O43490 RNU6-1223P-201ENST00000517124 104 ntBASIC1.14□□□□□ -2.23
PROM1O43490 PVT1_3.1-201ENST00000620853 95 ntBASIC1.14□□□□□ -2.23
PROM1O43490 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
PROM1O43490 RNU6-294P-201ENST00000364999 102 ntBASIC1.13□□□□□ -2.23
PROM1O43490 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
PROM1O43490 MIR520F-201ENST00000384824 87 ntBASIC1.13□□□□□ -2.23
PROM1O43490 MIR181B2-201ENST00000385004 89 ntBASIC1.13□□□□□ -2.23
PROM1O43490 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
PROM1O43490 SNRPGP12-201ENST00000449481 213 ntBASIC1.13□□□□□ -2.23
PROM1O43490 Y_RNA.697-201ENST00000516776 113 ntBASIC1.13□□□□□ -2.23
PROM1O43490 MIR8066-201ENST00000617280 78 ntBASIC1.13□□□□□ -2.23
PROM1O43490 RNU6-1134P-201ENST00000365156 101 ntBASIC1.12□□□□□ -2.23
PROM1O43490 RNU7-102P-201ENST00000458948 62 ntBASIC1.12□□□□□ -2.23
PROM1O43490 Y_RNA.190-201ENST00000363964 101 ntBASIC1.11□□□□□ -2.23
PROM1O43490 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
PROM1O43490 SNORD58A-201ENST00000383875 65 ntBASIC1.11□□□□□ -2.23
PROM1O43490 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
PROM1O43490 RNU1-119P-201ENST00000391122 165 ntBASIC1.11□□□□□ -2.23
PROM1O43490 RNU6-844P-201ENST00000517175 102 ntBASIC1.11□□□□□ -2.23
PROM1O43490 MIR4804-201ENST00000581683 73 ntBASIC1.11□□□□□ -2.23
PROM1O43490 MIR6788-201ENST00000618842 66 ntBASIC1.11□□□□□ -2.23
PROM1O43490 RNU6-369P-201ENST00000362515 102 ntBASIC1.1□□□□□ -2.23
PROM1O43490 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
PROM1O43490 SNORD116-10-201ENST00000363791 102 ntBASIC1.1□□□□□ -2.23
PROM1O43490 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
PROM1O43490 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
PROM1O43490 MIR1827-201ENST00000408549 66 ntBASIC1.1□□□□□ -2.23
PROM1O43490 SNORD100-201ENST00000408573 76 ntBASIC1.1□□□□□ -2.23
PROM1O43490 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
PROM1O43490 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
PROM1O43490 MIR151B-201ENST00000584249 96 ntBASIC1.1□□□□□ -2.23
PROM1O43490 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
PROM1O43490 AC025521.1-201ENST00000621624 286 ntBASIC1.1□□□□□ -2.23
PROM1O43490 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
PROM1O43490 MIR635-201ENST00000384830 98 ntBASIC1.09□□□□□ -2.23
PROM1O43490 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
PROM1O43490 AC026421.1-201ENST00000519101 163 ntBASIC1.09□□□□□ -2.23
PROM1O43490 AL513043.2-201ENST00000573941 143 ntBASIC1.09□□□□□ -2.23
PROM1O43490 MIR4679-1-201ENST00000637619 75 ntBASIC1.09□□□□□ -2.23
PROM1O43490 Y_RNA.558-201ENST00000384685 113 ntBASIC1.08□□□□□ -2.24
PROM1O43490 MIR516A2-201ENST00000384888 90 ntBASIC1.08□□□□□ -2.24
PROM1O43490 MIR516A1-201ENST00000385033 90 ntBASIC1.08□□□□□ -2.24
PROM1O43490 FABP5P4-201ENST00000437203 171 ntBASIC1.08□□□□□ -2.24
PROM1O43490 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
PROM1O43490 MIR548H5-201ENST00000580314 60 ntBASIC1.08□□□□□ -2.24
PROM1O43490 AC008608.1-201ENST00000603910 127 ntBASIC1.08□□□□□ -2.24
PROM1O43490 AL136317.1-201ENST00000612653 226 ntBASIC1.08□□□□□ -2.24
PROM1O43490 Y_RNA.56-201ENST00000362798 112 ntBASIC1.07□□□□□ -2.24
PROM1O43490 Y_RNA.205-201ENST00000364128 113 ntBASIC1.07□□□□□ -2.24
PROM1O43490 Y_RNA.536-201ENST00000384621 113 ntBASIC1.07□□□□□ -2.24
PROM1O43490 RNU6-535P-201ENST00000384722 107 ntBASIC1.07□□□□□ -2.24
PROM1O43490 SNORD63B-201ENST00000411005 70 ntBASIC1.07□□□□□ -2.24
PROM1O43490 RNU7-56P-201ENST00000458744 62 ntBASIC1.07□□□□□ -2.24
PROM1O43490 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
PROM1O43490 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
PROM1O43490 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
PROM1O43490 Y_RNA.178-201ENST00000363832 102 ntBASIC1.06□□□□□ -2.24
PROM1O43490 MIR520H-201ENST00000385126 88 ntBASIC1.06□□□□□ -2.24
PROM1O43490 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
PROM1O43490 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.06□□□□□ -2.24
PROM1O43490 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
PROM1O43490 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
PROM1O43490 RNU6-243P-201ENST00000391140 107 ntBASIC1.05□□□□□ -2.24
PROM1O43490 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
PROM1O43490 Y_RNA.609-201ENST00000410669 89 ntBASIC1.05□□□□□ -2.24
PROM1O43490 TRAJ51-201ENST00000504127 63 ntBASIC1.05□□□□□ -2.24
PROM1O43490 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
PROM1O43490 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PROM1O43490 RNU6-291P-201ENST00000384720 107 ntBASIC1.04□□□□□ -2.24
PROM1O43490 AC092628.1-201ENST00000436250 252 ntBASIC1.04□□□□□ -2.24
PROM1O43490 RNU7-195P-201ENST00000458793 62 ntBASIC1.04□□□□□ -2.24
PROM1O43490 RNU7-106P-201ENST00000459514 67 ntBASIC1.04□□□□□ -2.24
PROM1O43490 RNU6-448P-201ENST00000517052 107 ntBASIC1.04□□□□□ -2.24
PROM1O43490 SNORD116-22-201ENST00000384430 92 ntBASIC1.03□□□□□ -2.24
PROM1O43490 RNU6-519P-201ENST00000410590 108 ntBASIC1.03□□□□□ -2.24
PROM1O43490 U7.7-201ENST00000459276 60 ntBASIC1.03□□□□□ -2.24
PROM1O43490 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms