Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 MIR520F-201ENST00000384824 87 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 RNU1-119P-201ENST00000391122 165 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 RNU6-1254P-201ENST00000391266 104 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 Y_RNA.593-201ENST00000410292 98 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 RNU6-402P-201ENST00000410678 103 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 TRAJ51-201ENST00000504127 63 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 SNORA72.7-201ENST00000516349 94 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 AC008608.1-201ENST00000603910 127 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 RNU7-10P-201ENST00000607194 63 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HOXA3O43365 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
HOXA3O43365 RNY1P4-201ENST00000384595 115 ntBASIC1.17□□□□□ -2.22
HOXA3O43365 SNORA26.2-201ENST00000390922 122 ntBASIC1.17□□□□□ -2.22
HOXA3O43365 AC092628.1-201ENST00000436250 252 ntBASIC1.17□□□□□ -2.22
HOXA3O43365 MIR4668-201ENST00000582284 70 ntBASIC1.17□□□□□ -2.22
HOXA3O43365 IGLL4P-201ENST00000614590 133 ntBASIC1.17□□□□□ -2.22
HOXA3O43365 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HOXA3O43365 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HOXA3O43365 RNU6-820P-201ENST00000384273 107 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 RNU6-243P-201ENST00000391140 107 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 RNY4P29-201ENST00000410801 97 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 RNU6-448P-201ENST00000517052 107 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 AC062037.1-201ENST00000605302 128 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.16□□□□□ -2.22
HOXA3O43365 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HOXA3O43365 Y_RNA.388-201ENST00000383919 113 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 Y_RNA.620-201ENST00000411009 88 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 FABP5P4-201ENST00000437203 171 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 U7.7-201ENST00000459276 60 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 RNU6-1110P-201ENST00000516462 101 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 RNU6-267P-201ENST00000516714 103 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 AL136317.1-201ENST00000612653 226 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 RMST_2.1-201ENST00000617263 136 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 AL353770.2-201ENST00000620024 78 ntBASIC1.15□□□□□ -2.23
HOXA3O43365 MIR494-201ENST00000349529 81 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNY1P1-201ENST00000364372 112 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNU6-219P-201ENST00000364728 107 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 MIR489-201ENST00000384923 84 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNU6-519P-201ENST00000410590 108 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNU7-195P-201ENST00000458793 62 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
HOXA3O43365 RNA5SP245-201ENST00000364239 121 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 RNU6-675P-201ENST00000384236 104 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 RNU6-291P-201ENST00000384720 107 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 MIR200A-201ENST00000384875 90 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 AL161932.1-201ENST00000437408 146 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 snoU13.11-201ENST00000459219 104 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 Y_RNA.648-201ENST00000459455 110 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 AP003327.1-201ENST00000529684 127 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
HOXA3O43365 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.13□□□□□ -2.23
HOXA3O43365 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 MIR7974-201ENST00000615835 79 ntBASIC1.13□□□□□ -2.23
HOXA3O43365 RNU6-42P-201ENST00000384165 107 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 MIR520H-201ENST00000385126 88 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 MIR519A1-201ENST00000385257 85 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 SNORD4B-201ENST00000459083 72 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 RN7SKP12-201ENST00000516275 143 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 AC138907.6-201ENST00000568401 126 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 AC138869.1-201ENST00000568623 124 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 AL078603.1-201ENST00000603824 313 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
HOXA3O43365 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
HOXA3O43365 Y_RNA.809-201ENST00000516058 95 ntBASIC1.11□□□□□ -2.23
HOXA3O43365 RNA5SP220-201ENST00000516298 104 ntBASIC1.11□□□□□ -2.23
HOXA3O43365 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.11□□□□□ -2.23
HOXA3O43365 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HOXA3O43365 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
HOXA3O43365 RNU6-633P-201ENST00000362612 103 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 RNU6-1260P-201ENST00000362944 107 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 SNORD105-201ENST00000386910 85 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 RNU7-85P-201ENST00000458851 63 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 MIR4536-1-201ENST00000583537 88 ntBASIC1.1□□□□□ -2.23
HOXA3O43365 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXA3O43365 Y_RNA.73-201ENST00000362910 113 ntBASIC1.09□□□□□ -2.23
HOXA3O43365 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
HOXA3O43365 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
HOXA3O43365 MIR6734-201ENST00000621166 68 ntBASIC1.09□□□□□ -2.23
HOXA3O43365 RNU6-509P-201ENST00000363519 107 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 RNU6-957P-201ENST00000363652 99 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 RNU6-1152P-201ENST00000384576 107 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 MIR320A-201ENST00000385302 82 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 MIR1276-201ENST00000408707 83 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 RNU1-123P-201ENST00000458950 160 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 RNU6-65P-201ENST00000516332 98 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 SNORA31.14-201ENST00000516728 116 ntBASIC1.08□□□□□ -2.24
HOXA3O43365 uc_338.16-201ENST00000621804 95 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms