Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 DEFB131E-201ENST00000532329 154 ntBASIC0.46□□□□□ -2.34
PHF1O43189 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
PHF1O43189 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
PHF1O43189 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
PHF1O43189 Y_RNA.261-201ENST00000364631 102 ntBASIC0.45□□□□□ -2.34
PHF1O43189 RNA5SP205-201ENST00000364653 136 ntBASIC0.45□□□□□ -2.34
PHF1O43189 RNA5SP117-201ENST00000365294 118 ntBASIC0.45□□□□□ -2.34
PHF1O43189 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
PHF1O43189 RNU6-1168P-201ENST00000390831 104 ntBASIC0.45□□□□□ -2.34
PHF1O43189 MIR548I2-201ENST00000408348 149 ntBASIC0.45□□□□□ -2.34
PHF1O43189 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.45□□□□□ -2.34
PHF1O43189 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
PHF1O43189 RNU6-479P-201ENST00000516348 105 ntBASIC0.45□□□□□ -2.34
PHF1O43189 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
PHF1O43189 AC007012.1-201ENST00000567192 175 ntBASIC0.45□□□□□ -2.34
PHF1O43189 AL670379.3-201ENST00000605040 251 ntBASIC0.45□□□□□ -2.34
PHF1O43189 AL365222.1-201ENST00000614661 98 ntBASIC0.45□□□□□ -2.34
PHF1O43189 MIR6828-201ENST00000636181 60 ntBASIC0.45□□□□□ -2.34
PHF1O43189 RNA5SP245-201ENST00000364239 121 ntBASIC0.44□□□□□ -2.34
PHF1O43189 Y_RNA.281-201ENST00000364774 94 ntBASIC0.44□□□□□ -2.34
PHF1O43189 Y_RNA.377-201ENST00000365644 108 ntBASIC0.44□□□□□ -2.34
PHF1O43189 RNU6-571P-201ENST00000384128 107 ntBASIC0.44□□□□□ -2.34
PHF1O43189 RNU6-22P-201ENST00000384355 107 ntBASIC0.44□□□□□ -2.34
PHF1O43189 RNU6-1117P-201ENST00000384525 104 ntBASIC0.44□□□□□ -2.34
PHF1O43189 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
PHF1O43189 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
PHF1O43189 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
PHF1O43189 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
PHF1O43189 AC018659.1-201ENST00000551083 169 ntBASIC0.44□□□□□ -2.34
PHF1O43189 MIR548H5-201ENST00000580314 60 ntBASIC0.44□□□□□ -2.34
PHF1O43189 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
PHF1O43189 RNU6-1201P-201ENST00000384227 107 ntBASIC0.43□□□□□ -2.34
PHF1O43189 Y_RNA.549-201ENST00000384657 102 ntBASIC0.43□□□□□ -2.34
PHF1O43189 MIR644A-201ENST00000385262 94 ntBASIC0.43□□□□□ -2.34
PHF1O43189 RNU6-816P-201ENST00000390914 107 ntBASIC0.43□□□□□ -2.34
PHF1O43189 RNU6-1268P-201ENST00000391214 107 ntBASIC0.43□□□□□ -2.34
PHF1O43189 RNU6-1239P-201ENST00000391310 107 ntBASIC0.43□□□□□ -2.34
PHF1O43189 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
PHF1O43189 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
PHF1O43189 RNU7-10P-201ENST00000607194 63 ntBASIC0.43□□□□□ -2.34
PHF1O43189 MIR101-2-201ENST00000362195 79 ntBASIC0.42□□□□□ -2.34
PHF1O43189 RNU6-834P-201ENST00000362367 110 ntBASIC0.42□□□□□ -2.34
PHF1O43189 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
PHF1O43189 SNORA63.5-201ENST00000363548 123 ntBASIC0.42□□□□□ -2.34
PHF1O43189 Y_RNA.309-201ENST00000365046 111 ntBASIC0.42□□□□□ -2.34
PHF1O43189 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
PHF1O43189 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
PHF1O43189 RNU6-409P-201ENST00000384114 104 ntBASIC0.42□□□□□ -2.34
PHF1O43189 Y_RNA.507-201ENST00000384500 99 ntBASIC0.42□□□□□ -2.34
PHF1O43189 SNORD28-201ENST00000384706 75 ntBASIC0.42□□□□□ -2.34
PHF1O43189 MIR548A3-201ENST00000385297 97 ntBASIC0.42□□□□□ -2.34
PHF1O43189 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.42□□□□□ -2.34
PHF1O43189 RNA5SP47-201ENST00000517230 109 ntBASIC0.42□□□□□ -2.34
PHF1O43189 AC138869.1-201ENST00000568623 124 ntBASIC0.42□□□□□ -2.34
PHF1O43189 MIR4500-201ENST00000579472 76 ntBASIC0.42□□□□□ -2.34
PHF1O43189 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
PHF1O43189 Y_RNA.323-201ENST00000365157 109 ntBASIC0.41□□□□□ -2.34
PHF1O43189 RNU6-880P-201ENST00000384526 107 ntBASIC0.41□□□□□ -2.34
PHF1O43189 SNORA7.5-201ENST00000410672 110 ntBASIC0.41□□□□□ -2.34
PHF1O43189 TRAJ51-201ENST00000504127 63 ntBASIC0.41□□□□□ -2.34
PHF1O43189 RNU6-62P-201ENST00000516526 102 ntBASIC0.41□□□□□ -2.34
PHF1O43189 RNU6-789P-201ENST00000517105 102 ntBASIC0.41□□□□□ -2.34
PHF1O43189 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
PHF1O43189 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.41□□□□□ -2.34
PHF1O43189 SNORD38.1-201ENST00000363863 68 ntBASIC0.4□□□□□ -2.35
PHF1O43189 Y_RNA.247-201ENST00000364500 92 ntBASIC0.4□□□□□ -2.35
PHF1O43189 RNU6-1144P-201ENST00000384247 104 ntBASIC0.4□□□□□ -2.35
PHF1O43189 SNORD38.2-201ENST00000384470 69 ntBASIC0.4□□□□□ -2.35
PHF1O43189 MIR1265-201ENST00000408444 86 ntBASIC0.4□□□□□ -2.35
PHF1O43189 AC097635.1-201ENST00000450678 155 ntBASIC0.4□□□□□ -2.35
PHF1O43189 RNU6-469P-201ENST00000516253 101 ntBASIC0.4□□□□□ -2.35
PHF1O43189 SCARNA16.5-201ENST00000517114 183 ntBASIC0.4□□□□□ -2.35
PHF1O43189 MIR4694-201ENST00000578534 80 ntBASIC0.4□□□□□ -2.35
PHF1O43189 AC023932.2-201ENST00000603176 175 ntBASIC0.4□□□□□ -2.35
PHF1O43189 Y_RNA.35-201ENST00000362601 101 ntBASIC0.39□□□□□ -2.35
PHF1O43189 RNU6-170P-201ENST00000362832 104 ntBASIC0.39□□□□□ -2.35
PHF1O43189 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
PHF1O43189 RNA5SP403-201ENST00000363598 108 ntBASIC0.39□□□□□ -2.35
PHF1O43189 Y_RNA.155-201ENST00000363632 101 ntBASIC0.39□□□□□ -2.35
PHF1O43189 Y_RNA.173-201ENST00000363776 113 ntBASIC0.39□□□□□ -2.35
PHF1O43189 U8.6-201ENST00000364939 135 ntBASIC0.39□□□□□ -2.35
PHF1O43189 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
PHF1O43189 Y_RNA.567-201ENST00000384736 106 ntBASIC0.39□□□□□ -2.35
PHF1O43189 MIR548A1-201ENST00000385041 97 ntBASIC0.39□□□□□ -2.35
PHF1O43189 MIR577-201ENST00000385196 96 ntBASIC0.39□□□□□ -2.35
PHF1O43189 RNU4-61P-201ENST00000411243 107 ntBASIC0.39□□□□□ -2.35
PHF1O43189 BX276092.1-201ENST00000427368 251 ntBASIC0.39□□□□□ -2.35
PHF1O43189 RNU6-850P-201ENST00000516934 103 ntBASIC0.39□□□□□ -2.35
PHF1O43189 AC068339.1-201ENST00000526965 141 ntBASIC0.39□□□□□ -2.35
PHF1O43189 AL442128.1-201ENST00000615151 90 ntBASIC0.39□□□□□ -2.35
PHF1O43189 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.39□□□□□ -2.35
PHF1O43189 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
PHF1O43189 SNORD116-21-201ENST00000384507 92 ntBASIC0.38□□□□□ -2.35
PHF1O43189 RNU6-476P-201ENST00000384726 107 ntBASIC0.38□□□□□ -2.35
PHF1O43189 MIR635-201ENST00000384830 98 ntBASIC0.38□□□□□ -2.35
PHF1O43189 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
PHF1O43189 RNU2-51P-201ENST00000410708 197 ntBASIC0.38□□□□□ -2.35
PHF1O43189 SNORD63B-201ENST00000411005 70 ntBASIC0.38□□□□□ -2.35
PHF1O43189 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
PHF1O43189 MIR5009-201ENST00000578736 100 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms