Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 Y_RNA.773-201ENST00000607168 90 ntBASIC0.09□□□□□ -2.4
NPHP1O15259 SNORA2A-201ENST00000383885 135 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 MIR34C-201ENST00000384831 77 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 MIR519A1-201ENST00000385257 85 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 AL158147.1-201ENST00000443970 75 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 U7.2-201ENST00000607576 63 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 AC090425.1-201ENST00000610007 140 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 MIR6759-201ENST00000638110 65 ntBASIC0.08□□□□□ -2.4
NPHP1O15259 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
NPHP1O15259 Y_RNA.213-201ENST00000364178 111 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 Y_RNA.221-201ENST00000364248 96 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 RNA5SP128-201ENST00000365305 116 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 Y_RNA.360-201ENST00000365512 102 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 Y_RNA.362-201ENST00000365518 110 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 SNORD41.1-201ENST00000391000 69 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 MIR1263-201ENST00000408324 86 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 RNU6-521P-201ENST00000516663 105 ntBASIC0.07□□□□□ -2.4
NPHP1O15259 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RNU6-571P-201ENST00000384128 107 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 MIR759-201ENST00000390224 91 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RNU6-127P-201ENST00000390897 107 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 SNORD63B-201ENST00000411005 70 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RPL39P34-201ENST00000477141 156 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RNU6-1232P-201ENST00000516299 86 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RNA5SP476-201ENST00000516613 103 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RNU6-794P-201ENST00000517261 64 ntBASIC0.06□□□□□ -2.4
NPHP1O15259 RNU6-170P-201ENST00000362832 104 ntBASIC0.05□□□□□ -2.4
NPHP1O15259 Y_RNA.555-201ENST00000384673 110 ntBASIC0.05□□□□□ -2.4
NPHP1O15259 RNU7-129P-201ENST00000516128 62 ntBASIC0.05□□□□□ -2.4
NPHP1O15259 MIR1255B1-201ENST00000636325 63 ntBASIC0.05□□□□□ -2.4
NPHP1O15259 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
NPHP1O15259 Y_RNA.488-201ENST00000384403 102 ntBASIC0.04□□□□□ -2.4
NPHP1O15259 RNU6-735P-201ENST00000410612 107 ntBASIC0.04□□□□□ -2.4
NPHP1O15259 RNU7-195P-201ENST00000458793 62 ntBASIC0.04□□□□□ -2.4
NPHP1O15259 Y_RNA.809-201ENST00000516058 95 ntBASIC0.04□□□□□ -2.4
NPHP1O15259 RNU6-781P-201ENST00000516377 101 ntBASIC0.04□□□□□ -2.4
NPHP1O15259 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
NPHP1O15259 Y_RNA.528-201ENST00000384575 108 ntBASIC0.03□□□□□ -2.4
NPHP1O15259 RNU6-269P-201ENST00000391077 97 ntBASIC0.03□□□□□ -2.4
NPHP1O15259 RNA5SP272-201ENST00000516095 111 ntBASIC0.03□□□□□ -2.4
NPHP1O15259 RNU6-426P-201ENST00000516464 97 ntBASIC0.03□□□□□ -2.4
NPHP1O15259 RNU6-1234P-201ENST00000516877 103 ntBASIC0.03□□□□□ -2.4
NPHP1O15259 MIR499B-201ENST00000636498 73 ntBASIC0.03□□□□□ -2.4
NPHP1O15259 RNU6-1260P-201ENST00000362944 107 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 MIR548D2-201ENST00000384955 97 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 RNU7-106P-201ENST00000459514 67 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 RNU6-850P-201ENST00000516934 103 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 MIR4636-201ENST00000582271 80 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 SNORA70.25-201ENST00000612741 95 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 MIR6086-201ENST00000638065 55 ntBASIC0.02□□□□□ -2.41
NPHP1O15259 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 Y_RNA.170-201ENST00000363746 110 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 Y_RNA.180-201ENST00000363867 113 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 Y_RNA.342-201ENST00000365352 113 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 Y_RNA.464-201ENST00000384282 110 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 RNU7-200P-201ENST00000516105 62 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 RNU6-1265P-201ENST00000516342 103 ntBASIC0.01□□□□□ -2.41
NPHP1O15259 Y_RNA.35-201ENST00000362601 101 ntBASIC0□□□□□ -2.41
NPHP1O15259 Y_RNA.323-201ENST00000365157 109 ntBASIC0□□□□□ -2.41
NPHP1O15259 SNORD38.2-201ENST00000384470 69 ntBASIC0□□□□□ -2.41
NPHP1O15259 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
NPHP1O15259 RNU6-1212P-201ENST00000517023 104 ntBASIC0□□□□□ -2.41
NPHP1O15259 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
NPHP1O15259 AC073869.9-201ENST00000641610 120 ntBASIC0□□□□□ -2.41
NPHP1O15259 MIR610-201ENST00000385139 96 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 MIR501-201ENST00000390204 84 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 SNORA7.5-201ENST00000410672 110 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 MIR3920-201ENST00000581751 86 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 MIR4802-201ENST00000581881 80 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 uc_338.28-201ENST00000612082 187 ntBASIC-0.01□□□□□ -2.41
NPHP1O15259 RNU6-235P-201ENST00000362644 107 ntBASIC-0.02□□□□□ -2.41
NPHP1O15259 RNU6-363P-201ENST00000362895 105 ntBASIC-0.02□□□□□ -2.41
NPHP1O15259 RNU6-524P-201ENST00000384270 107 ntBASIC-0.02□□□□□ -2.41
NPHP1O15259 MTND4LP9-201ENST00000427694 174 ntBASIC-0.02□□□□□ -2.41
NPHP1O15259 U7.6-201ENST00000610841 64 ntBASIC-0.02□□□□□ -2.41
NPHP1O15259 SNORD58C-201ENST00000365223 64 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MIR516A2-201ENST00000384888 90 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MIR516A1-201ENST00000385033 90 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MIR548H2-201ENST00000408874 88 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 HAR1A.1-201ENST00000459583 118 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 RNU7-13P-201ENST00000516413 62 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MTND5P40-201ENST00000559945 246 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MIR5589-201ENST00000579442 60 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 MIR548AD-201ENST00000584780 82 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 AC025166.1-201ENST00000612411 163 ntBASIC-0.03□□□□□ -2.41
NPHP1O15259 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 SNORD114-5-201ENST00000362928 70 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 AL353813.1-201ENST00000440700 253 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 MIR4743-201ENST00000584576 69 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 AL512310.12-203ENST00000640543 90 ntBASIC-0.04□□□□□ -2.42
NPHP1O15259 RNU6-509P-201ENST00000363519 107 ntBASIC-0.05□□□□□ -2.42
NPHP1O15259 RNY4P6-201ENST00000363667 96 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms