Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC103810.9-201ENST00000606688 112 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.78□□□□□ -2.28
MBD3L4A6NDZ8 RNY1P8-201ENST00000383970 114 ntBASIC0.78□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.78□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-919P-201ENST00000516731 104 ntBASIC0.78□□□□□ -2.28
MBD3L4A6NDZ8 RNU7-10P-201ENST00000607194 63 ntBASIC0.78□□□□□ -2.28
MBD3L4A6NDZ8 MIR577-201ENST00000385196 96 ntBASIC0.77□□□□□ -2.29
MBD3L4A6NDZ8 MIR644A-201ENST00000385262 94 ntBASIC0.77□□□□□ -2.29
MBD3L4A6NDZ8 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
MBD3L4A6NDZ8 SPINT5P-201ENST00000448174 155 ntBASIC0.77□□□□□ -2.29
MBD3L4A6NDZ8 MIR3678-201ENST00000578455 94 ntBASIC0.77□□□□□ -2.29
MBD3L4A6NDZ8 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 SNORD38.1-201ENST00000363863 68 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 MIR635-201ENST00000384830 98 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 AL035461.1-201ENST00000421490 332 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 MIR4694-201ENST00000578534 80 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 uc_338.28-201ENST00000612082 187 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 AL442128.1-201ENST00000615151 90 ntBASIC0.76□□□□□ -2.29
MBD3L4A6NDZ8 Y_RNA.163-201ENST00000363702 113 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-44P-201ENST00000384045 107 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-571P-201ENST00000384128 107 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-106P-201ENST00000384405 107 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-554P-201ENST00000410466 106 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 AC096720.1-201ENST00000604441 183 ntBASIC0.75□□□□□ -2.29
MBD3L4A6NDZ8 RNY3P2-201ENST00000362918 102 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-832P-201ENST00000363319 107 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-1099P-201ENST00000363533 107 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 RNA5SP245-201ENST00000364239 121 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 MIR140-201ENST00000385282 100 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 MIR548G-201ENST00000408442 89 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 SNRPGP12-201ENST00000449481 213 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-135P-201ENST00000516769 101 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 AC138907.6-201ENST00000568401 126 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 AC138869.1-201ENST00000568623 124 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-90P-201ENST00000606352 106 ntBASIC0.74□□□□□ -2.29
MBD3L4A6NDZ8 SNORA63.4-201ENST00000362763 126 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-1229P-201ENST00000364295 107 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 Y_RNA.377-201ENST00000365644 108 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 MIR1302-5-201ENST00000408164 150 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 AC092628.1-201ENST00000436250 252 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-850P-201ENST00000516934 103 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 AC141557.1-201ENST00000540982 400 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 MIR3613-201ENST00000579844 87 ntBASIC0.73□□□□□ -2.29
MBD3L4A6NDZ8 RNU6-170P-201ENST00000362832 104 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 SNORA19.1-201ENST00000410656 129 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 TRAJ51-201ENST00000504127 63 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.72□□□□□ -2.29
MBD3L4A6NDZ8 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-755P-201ENST00000364400 103 ntBASIC0.71□□□□□ -2.3
MBD3L4A6NDZ8 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.659-201ENST00000515994 113 ntBASIC0.71□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
MBD3L4A6NDZ8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.71□□□□□ -2.3
MBD3L4A6NDZ8 RNU4-36P-201ENST00000364294 144 ntBASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 SNORA51.5-201ENST00000384126 131 ntBASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 SNORD63B-201ENST00000411005 70 ntBASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-904P-201ENST00000516206 101 ntBASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 RNA5SP94-201ENST00000516917 108 ntBASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.78-201ENST00000362970 110 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.374-201ENST00000365606 101 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-756P-201ENST00000383997 107 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 MIR590-201ENST00000385008 97 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 AL031737.1-201ENST00000450125 223 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
MBD3L4A6NDZ8 MIR450A1-201ENST00000362262 91 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 MIR193B-201ENST00000384907 83 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 MIR599-201ENST00000385069 95 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 AC097635.1-201ENST00000450678 155 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 AC092634.7-201ENST00000621022 103 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 AC091304.10-201ENST00000641554 121 ntBASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.10-201ENST00000362371 110 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-766P-201ENST00000362478 107 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 SNORD115-24-201ENST00000363528 82 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.173-201ENST00000363776 113 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-1163P-201ENST00000364516 107 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-1113P-201ENST00000384348 107 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 AC109327.2-201ENST00000448339 378 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 AC244505.6-201ENST00000452829 130 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 RNU7-195P-201ENST00000458793 62 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-537P-201ENST00000517277 103 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 MIR4639-201ENST00000584938 69 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms