Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.6□□□□□ -2.31
TCRBV7S3A2A0A539 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
TCRBV7S3A2A0A539 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.6□□□□□ -2.31
TCRBV7S3A2A0A539 RNY1P10-201ENST00000363268 113 ntBASIC0.59□□□□□ -2.31
TCRBV7S3A2A0A539 AL606490.4-201ENST00000423117 127 ntBASIC0.59□□□□□ -2.31
TCRBV7S3A2A0A539 CYP3A137P-201ENST00000562436 69 ntBASIC0.59□□□□□ -2.31
TCRBV7S3A2A0A539 MIR3613-201ENST00000579844 87 ntBASIC0.59□□□□□ -2.31
TCRBV7S3A2A0A539 MIR4439-201ENST00000583746 80 ntBASIC0.59□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.10-201ENST00000362371 110 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 SNORA36.1-201ENST00000363424 132 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1163P-201ENST00000364516 107 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1325P-201ENST00000364905 105 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 RNU7-106P-201ENST00000459514 67 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1260P-201ENST00000362944 107 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.163-201ENST00000363702 113 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 RNU4-36P-201ENST00000364294 144 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1229P-201ENST00000364295 107 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 SNORD114-22-201ENST00000365423 72 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-106P-201ENST00000384405 107 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.567-201ENST00000384736 106 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 MIR599-201ENST00000385069 95 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 RN7SKP12-201ENST00000516275 143 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 AC092634.7-201ENST00000621022 103 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 AC244669.1-204ENST00000621564 178 ntBASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
TCRBV7S3A2A0A539 SNORD115-24-201ENST00000363528 82 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 RNA5SP403-201ENST00000363598 108 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 SNORD45B-201ENST00000364617 72 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 RNA5SP517-201ENST00000364724 117 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-215P-201ENST00000365169 102 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 MIR1302-5-201ENST00000408164 150 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 MIR1276-201ENST00000408707 83 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.601-201ENST00000410500 113 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 RNU7-195P-201ENST00000458793 62 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.809-201ENST00000516058 95 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-904P-201ENST00000516206 101 ntBASIC0.56□□□□□ -2.32
TCRBV7S3A2A0A539 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 MIR516A2-201ENST00000384888 90 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 MIR516A1-201ENST00000385033 90 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 RNY4P18-201ENST00000391107 89 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1254P-201ENST00000391266 104 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TCRBV7S3A2A0A539 MIR337-201ENST00000362281 93 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.57-201ENST00000362806 113 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 SNORD36A-201ENST00000362874 73 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-554P-201ENST00000410466 106 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 RPS29P1-201ENST00000465274 159 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.659-201ENST00000515994 113 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 RNA5SP268-201ENST00000516828 124 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 RNU7-161P-201ENST00000517289 62 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 AC091304.10-201ENST00000641554 121 ntBASIC0.54□□□□□ -2.32
TCRBV7S3A2A0A539 Y_RNA.95-201ENST00000363079 95 ntBASIC0.53□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1125P-201ENST00000363601 107 ntBASIC0.53□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-1244P-201ENST00000363614 108 ntBASIC0.53□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-480P-201ENST00000384332 107 ntBASIC0.53□□□□□ -2.32
TCRBV7S3A2A0A539 AC109327.2-201ENST00000448339 378 ntBASIC0.53□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-537P-201ENST00000517277 103 ntBASIC0.53□□□□□ -2.32
TCRBV7S3A2A0A539 RNU6-755P-201ENST00000364400 103 ntBASIC0.52□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-1113P-201ENST00000384348 107 ntBASIC0.52□□□□□ -2.33
TCRBV7S3A2A0A539 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
TCRBV7S3A2A0A539 Y_RNA.221-201ENST00000364248 96 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 SNORD20-201ENST00000384550 80 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-243P-201ENST00000391140 107 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 SCARNA23-201ENST00000516060 130 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-919P-201ENST00000516731 104 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 uc_338.28-201ENST00000612082 187 ntBASIC0.51□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-726P-201ENST00000364680 107 ntBASIC0.5□□□□□ -2.33
TCRBV7S3A2A0A539 SNORA19.1-201ENST00000410656 129 ntBASIC0.5□□□□□ -2.33
TCRBV7S3A2A0A539 RNA5SP227-201ENST00000516184 113 ntBASIC0.5□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-1265P-201ENST00000516342 103 ntBASIC0.5□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-86P-201ENST00000606534 107 ntBASIC0.5□□□□□ -2.33
TCRBV7S3A2A0A539 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.5□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-524P-201ENST00000384270 107 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-813P-201ENST00000384691 107 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 MIR181B2-201ENST00000385004 89 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 SNORD41.1-201ENST00000391000 69 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 SNORD71-201ENST00000411292 86 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 MIR4777-201ENST00000583710 86 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 Y_RNA.818-201ENST00000618813 71 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 AC067863.3-201ENST00000624172 122 ntBASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
TCRBV7S3A2A0A539 Y_RNA.4-201ENST00000362333 112 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-766P-201ENST00000362478 107 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 SNORA51.5-201ENST00000384126 131 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 MIR590-201ENST00000385008 97 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 281.6 ms