Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AP003327.1-201ENST00000529684 127 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 MIR548H5-201ENST00000580314 60 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 Y_RNA.377-201ENST00000365644 108 ntBASIC1.08□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.567-201ENST00000384736 106 ntBASIC1.08□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.601-201ENST00000410500 113 ntBASIC1.08□□□□□ -2.24
CCDC163A0A0D9SF12 AC109327.2-201ENST00000448339 378 ntBASIC1.08□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-795P-201ENST00000516323 103 ntBASIC1.08□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-86P-201ENST00000606534 107 ntBASIC1.08□□□□□ -2.24
CCDC163A0A0D9SF12 HSBP1P2-201ENST00000299671 229 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 MIR373-201ENST00000362273 69 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.56-201ENST00000362798 112 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 SNORD45B-201ENST00000364617 72 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 MIR608-201ENST00000384820 100 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 AC244098.3-201ENST00000424803 96 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-109P-201ENST00000516364 107 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-184P-201ENST00000516514 107 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 MIR5000-201ENST00000577717 103 ntBASIC1.07□□□□□ -2.24
CCDC163A0A0D9SF12 RNA5SP245-201ENST00000364239 121 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-571P-201ENST00000384128 107 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 MIR644A-201ENST00000385262 94 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 SCARNA23-201ENST00000516060 130 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-469P-201ENST00000516253 101 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 SNORA31.14-201ENST00000516728 116 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 RNU7-10P-201ENST00000607194 63 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 AC091304.10-201ENST00000641554 121 ntBASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC163A0A0D9SF12 SNORA36.2-201ENST00000384004 127 ntBASIC1.05□□□□□ -2.24
CCDC163A0A0D9SF12 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-904P-201ENST00000516206 101 ntBASIC1.05□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-766P-201ENST00000362478 107 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.32-201ENST00000362589 110 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.57-201ENST00000362806 113 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.78-201ENST00000362970 110 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.81-201ENST00000362997 102 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.174-201ENST00000363781 105 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 AC092628.1-201ENST00000436250 252 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 TRAJ51-201ENST00000504127 63 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 AC012531.4-201ENST00000616509 177 ntBASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-755P-201ENST00000364400 103 ntBASIC1.03□□□□□ -2.24
CCDC163A0A0D9SF12 RNU6-1163P-201ENST00000364516 107 ntBASIC1.03□□□□□ -2.24
CCDC163A0A0D9SF12 Y_RNA.342-201ENST00000365352 113 ntBASIC1.03□□□□□ -2.24
CCDC163A0A0D9SF12 SNRPGP12-201ENST00000449481 213 ntBASIC1.03□□□□□ -2.24
CCDC163A0A0D9SF12 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
CCDC163A0A0D9SF12 uc_338.16-201ENST00000621804 95 ntBASIC1.03□□□□□ -2.24
CCDC163A0A0D9SF12 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-170P-201ENST00000362832 104 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.95-201ENST00000363079 95 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.467-201ENST00000384297 102 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 MIR516A2-201ENST00000384888 90 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 MIR516A1-201ENST00000385033 90 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 SNORD63B-201ENST00000411005 70 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 AC138907.6-201ENST00000568401 126 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 AC138869.1-201ENST00000568623 124 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 MIR548Z-201ENST00000584743 97 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CCDC163A0A0D9SF12 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 RNA5SP325-201ENST00000363756 130 ntBASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.173-201ENST00000363776 113 ntBASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-147P-201ENST00000383983 107 ntBASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
CCDC163A0A0D9SF12 MIR18A-201ENST00000362310 71 ntBASIC1□□□□□ -2.25
CCDC163A0A0D9SF12 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
CCDC163A0A0D9SF12 RNU7-195P-201ENST00000458793 62 ntBASIC1□□□□□ -2.25
CCDC163A0A0D9SF12 RNU7-106P-201ENST00000459514 67 ntBASIC1□□□□□ -2.25
CCDC163A0A0D9SF12 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-1125P-201ENST00000363601 107 ntBASIC0.99□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-480P-201ENST00000384332 107 ntBASIC0.99□□□□□ -2.25
CCDC163A0A0D9SF12 MIR181B2-201ENST00000385004 89 ntBASIC0.99□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.107-201ENST00000363190 121 ntBASIC0.98□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.544-201ENST00000384650 113 ntBASIC0.98□□□□□ -2.25
CCDC163A0A0D9SF12 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.809-201ENST00000516058 95 ntBASIC0.98□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.205-201ENST00000364128 113 ntBASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 Y_RNA.221-201ENST00000364248 96 ntBASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 MIR599-201ENST00000385069 95 ntBASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-243P-201ENST00000391140 107 ntBASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 MIR4777-201ENST00000583710 86 ntBASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 AC103810.7-201ENST00000607821 91 ntBASIC0.97□□□□□ -2.25
CCDC163A0A0D9SF12 RNU6-1229P-201ENST00000364295 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-32P-201ENST00000383948 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-13P-201ENST00000384248 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-12P-201ENST00000384604 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-813P-201ENST00000384691 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-41P-201ENST00000384741 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 MIR4439-201ENST00000583746 80 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 Y_RNA.818-201ENST00000618813 71 ntBASIC0.96□□□□□ -2.26
CCDC163A0A0D9SF12 SNORD115-24-201ENST00000363528 82 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 RNY1P8-201ENST00000383970 114 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms