Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 Y_RNA.525-201ENST00000384570 113 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR516A2-201ENST00000384888 90 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR516A1-201ENST00000385033 90 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 SNORD41.1-201ENST00000391000 69 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR513C-201ENST00000401352 84 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 SNORA7.5-201ENST00000410672 110 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 AL161932.1-201ENST00000437408 146 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.692-201ENST00000516627 105 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.700-201ENST00000516806 100 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-850P-201ENST00000516934 103 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 AP001328.1-201ENST00000528550 176 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR548X2-201ENST00000579776 100 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR3920-201ENST00000581751 86 ntBASIC0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.374-201ENST00000365606 101 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-524P-201ENST00000384270 107 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 RNA5SP484-201ENST00000458857 111 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-346P-201ENST00000516288 111 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 MIR548AG2-201ENST00000581228 64 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 MIR3925-201ENST00000584674 77 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 AC067863.3-201ENST00000624172 122 ntBASIC0□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 SNORD115-19-201ENST00000363098 82 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 SNORD115-18-201ENST00000363293 82 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 SNORD115-17-201ENST00000364612 82 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-756P-201ENST00000383997 107 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 AL158147.1-201ENST00000443970 75 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 uc_338.28-201ENST00000612082 187 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 AP001340.1-201ENST00000624405 217 ntBASIC-0.01□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-170P-201ENST00000362832 104 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 MIR106A-201ENST00000384870 81 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 HMGN2P22-201ENST00000427588 175 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 AC097635.1-201ENST00000450678 155 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-255P-201ENST00000516957 105 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-182P-201ENST00000516970 105 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 NAMPTP3-201ENST00000569273 224 ntBASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.02□□□□□ -2.41
TRAV40A0A0B4J280 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.03□□□□□ -2.41
TRAV40A0A0B4J280 MTND4LP9-201ENST00000427694 174 ntBASIC-0.03□□□□□ -2.41
TRAV40A0A0B4J280 MIR3163-201ENST00000581592 73 ntBASIC-0.03□□□□□ -2.41
TRAV40A0A0B4J280 MIR4677-201ENST00000584153 80 ntBASIC-0.03□□□□□ -2.41
TRAV40A0A0B4J280 RNU6-161P-201ENST00000363051 106 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-929P-201ENST00000384429 107 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 MIR548D2-201ENST00000384955 97 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 MIR548I2-201ENST00000408348 149 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 MIR548AD-201ENST00000584780 82 ntBASIC-0.04□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-647P-201ENST00000364243 107 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-571P-201ENST00000384128 107 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 MIR519A1-201ENST00000385257 85 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 RNU7-200P-201ENST00000516105 62 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-782P-201ENST00000516852 104 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 RNU7-10P-201ENST00000607194 63 ntBASIC-0.05□□□□□ -2.42
TRAV40A0A0B4J280 SNORD58C-201ENST00000365223 64 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 MIR759-201ENST00000390224 91 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 SNORD110-201ENST00000408189 75 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-257P-201ENST00000410238 98 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-848P-201ENST00000515948 107 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-617P-201ENST00000516147 107 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-473P-201ENST00000516164 107 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 MTND5P40-201ENST00000559945 246 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 U7.2-201ENST00000607576 63 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 MTND5P18-201ENST00000445624 1801 ntBASIC-0.06□□□□□ -2.42
TRAV40A0A0B4J280 SNORD36A-201ENST00000362874 73 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 MIR519E-201ENST00000385075 84 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 RNA5SP163-201ENST00000410304 99 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 AC006210.1-201ENST00000424882 111 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 SPINT5P-201ENST00000448174 155 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 RNU7-107P-201ENST00000459121 61 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 RNU7-13P-201ENST00000516413 62 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 MIR5706-201ENST00000579841 80 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 U6.100-201ENST00000636230 99 ntBASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 AL512310.12-203ENST00000640543 90 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms