Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR613-201ENST00000385248 95 ntBASIC0.63□□□□□ -2.31
COL4A3BPQ9Y5P4 Y_RNA.586-201ENST00000391146 98 ntBASIC0.63□□□□□ -2.31
COL4A3BPQ9Y5P4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A3BPQ9Y5P4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
COL4A3BPQ9Y5P4 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
COL4A3BPQ9Y5P4 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
COL4A3BPQ9Y5P4 SNORD38.2-201ENST00000384470 69 ntBASIC0.62□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR3133-201ENST00000583157 78 ntBASIC0.62□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR518A1-201ENST00000385068 85 ntBASIC0.61□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-772P-201ENST00000516042 105 ntBASIC0.61□□□□□ -2.31
COL4A3BPQ9Y5P4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.61□□□□□ -2.31
COL4A3BPQ9Y5P4 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
COL4A3BPQ9Y5P4 MTND5P18-201ENST00000445624 1801 ntBASIC0.61□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.6□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR635-201ENST00000384830 98 ntBASIC0.6□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR548I2-201ENST00000408348 149 ntBASIC0.6□□□□□ -2.31
COL4A3BPQ9Y5P4 AC092628.1-201ENST00000436250 252 ntBASIC0.6□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-521P-201ENST00000516663 105 ntBASIC0.6□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR376B-201ENST00000614515 100 ntBASIC0.6□□□□□ -2.31
COL4A3BPQ9Y5P4 SNORD28-201ENST00000384706 75 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-1234P-201ENST00000516877 103 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-971P-201ENST00000516920 106 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 Y_RNA.773-201ENST00000607168 90 ntBASIC0.59□□□□□ -2.31
COL4A3BPQ9Y5P4 AL157777.2-201ENST00000258070 137 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 SNORA63.5-201ENST00000363548 123 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-80P-201ENST00000384195 107 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 RNA5SP268-201ENST00000516828 124 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 RNA5SP47-201ENST00000517230 109 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 AC091304.10-201ENST00000641554 121 ntBASIC0.58□□□□□ -2.32
COL4A3BPQ9Y5P4 SNORD118-201ENST00000363593 134 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 AC244505.6-201ENST00000452829 130 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-863P-201ENST00000515989 104 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 RNA5SP227-201ENST00000516184 113 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-229P-201ENST00000516614 102 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
COL4A3BPQ9Y5P4 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU4-67P-201ENST00000364569 141 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 Y_RNA.360-201ENST00000365512 102 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 Y_RNA.507-201ENST00000384500 99 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-735P-201ENST00000410612 107 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 MIR6828-201ENST00000636181 60 ntBASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
COL4A3BPQ9Y5P4 MIRLET7D-201ENST00000362263 87 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-704P-201ENST00000364162 103 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 RNA5SP245-201ENST00000364239 121 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-571P-201ENST00000384128 107 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 RNA5SP193-201ENST00000410353 107 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 SUMO1P3-201ENST00000439961 304 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 AC244669.1-204ENST00000621564 178 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 MIR1255B1-201ENST00000636325 63 ntBASIC0.55□□□□□ -2.32
COL4A3BPQ9Y5P4 AC090625.1-201ENST00000357130 210 ntBASIC0.54□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-774P-201ENST00000363238 107 ntBASIC0.54□□□□□ -2.32
COL4A3BPQ9Y5P4 MIR34C-201ENST00000384831 77 ntBASIC0.54□□□□□ -2.32
COL4A3BPQ9Y5P4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.54□□□□□ -2.32
COL4A3BPQ9Y5P4 RNU6-363P-201ENST00000362895 105 ntBASIC0.53□□□□□ -2.32
COL4A3BPQ9Y5P4 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
COL4A3BPQ9Y5P4 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
COL4A3BPQ9Y5P4 BX276092.1-201ENST00000427368 251 ntBASIC0.53□□□□□ -2.32
COL4A3BPQ9Y5P4 AL512310.12-203ENST00000640543 90 ntBASIC0.53□□□□□ -2.32
COL4A3BPQ9Y5P4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.52□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR548M-201ENST00000408260 86 ntBASIC0.52□□□□□ -2.33
COL4A3BPQ9Y5P4 SNORA7.5-201ENST00000410672 110 ntBASIC0.52□□□□□ -2.33
COL4A3BPQ9Y5P4 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
COL4A3BPQ9Y5P4 AC097635.1-201ENST00000450678 155 ntBASIC0.52□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-170P-201ENST00000362832 104 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-409P-201ENST00000384114 104 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR1912-201ENST00000410389 80 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU7-107P-201ENST00000459121 61 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.712-201ENST00000517011 92 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 RN7SL793P-201ENST00000583259 296 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 U6.95-201ENST00000636931 70 ntBASIC0.51□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.155-201ENST00000363632 101 ntBASIC0.5□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.344-201ENST00000365381 112 ntBASIC0.5□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU2-59P-201ENST00000410482 191 ntBASIC0.5□□□□□ -2.33
COL4A3BPQ9Y5P4 SNRPGP12-201ENST00000449481 213 ntBASIC0.5□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-1018P-201ENST00000516577 106 ntBASIC0.5□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-1313P-201ENST00000362622 102 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR519A1-201ENST00000385257 85 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.630-201ENST00000411370 108 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 RPL39P34-201ENST00000477141 156 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 TRAJ51-201ENST00000504127 63 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 RNA5SP480-201ENST00000516840 109 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 MTND5P40-201ENST00000559945 246 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR3914-2-201ENST00000637339 95 ntBASIC0.49□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.362-201ENST00000365518 110 ntBASIC0.48□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR599-201ENST00000385069 95 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms