Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 MIR548A1-201ENST00000385041 97 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 AC008267.6-201ENST00000441664 139 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 SNORD33.1-201ENST00000516213 88 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 AC007012.1-201ENST00000567192 175 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 MIR548H5-201ENST00000580314 60 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 uc_338.16-201ENST00000621804 95 ntBASIC0.62□□□□□ -2.31
CLDN16Q9Y5I7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-363P-201ENST00000362895 105 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 Y_RNA.362-201ENST00000365518 110 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-81P-201ENST00000365608 104 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-409P-201ENST00000384114 104 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 MIR34C-201ENST00000384831 77 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-816P-201ENST00000390914 107 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-1268P-201ENST00000391214 107 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-1239P-201ENST00000391310 107 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 MIR3910-1-201ENST00000580936 111 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 RNU7-10P-201ENST00000607194 63 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 AC132825.6-201ENST00000638861 357 ntBASIC0.61□□□□□ -2.31
CLDN16Q9Y5I7 SNORA63.5-201ENST00000363548 123 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 BX276092.1-201ENST00000427368 251 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 MTND5P40-201ENST00000559945 246 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 AC022709.1-201ENST00000615967 87 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 AC092634.7-201ENST00000621022 103 ntBASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CLDN16Q9Y5I7 Y_RNA.261-201ENST00000364631 102 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 MIR635-201ENST00000384830 98 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-62P-201ENST00000516526 102 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 RNU6-135P-201ENST00000516769 101 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 AL670379.3-201ENST00000605040 251 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
CLDN16Q9Y5I7 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 RNA5SP245-201ENST00000364239 121 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 RNU6-1117P-201ENST00000384525 104 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 MIR518E-201ENST00000385252 88 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 MIR1912-201ENST00000410389 80 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 RPL39P34-201ENST00000477141 156 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 RNA5SP94-201ENST00000516917 108 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 AC138869.1-201ENST00000568623 124 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 AL365222.1-201ENST00000614661 98 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 AL162726.3-218ENST00000636401 95 ntBASIC0.58□□□□□ -2.32
CLDN16Q9Y5I7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 SPINT5P-201ENST00000448174 155 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 RNA5SP436-201ENST00000516020 115 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 MIR4679-2-201ENST00000578358 77 ntBASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.56□□□□□ -2.32
CLDN16Q9Y5I7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.55□□□□□ -2.32
CLDN16Q9Y5I7 Y_RNA.355-201ENST00000365462 98 ntBASIC0.55□□□□□ -2.32
CLDN16Q9Y5I7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
CLDN16Q9Y5I7 MIR548I2-201ENST00000408348 149 ntBASIC0.55□□□□□ -2.32
CLDN16Q9Y5I7 SNORD71-201ENST00000411292 86 ntBASIC0.55□□□□□ -2.32
CLDN16Q9Y5I7 AL035470.1-201ENST00000622571 220 ntBASIC0.55□□□□□ -2.32
CLDN16Q9Y5I7 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
CLDN16Q9Y5I7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.54□□□□□ -2.32
CLDN16Q9Y5I7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
CLDN16Q9Y5I7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 Y_RNA.353-201ENST00000365440 108 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 RNU6-571P-201ENST00000384128 107 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 RNU4-61P-201ENST00000411243 107 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 RNA5SP220-201ENST00000516298 104 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 MIR4639-201ENST00000584938 69 ntBASIC0.53□□□□□ -2.32
CLDN16Q9Y5I7 RNU6-170P-201ENST00000362832 104 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 SNORD115-24-201ENST00000363528 82 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 SNORD38.1-201ENST00000363863 68 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-22P-201ENST00000384355 107 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 SNORD116-21-201ENST00000384507 92 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-1154P-201ENST00000391001 104 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 SNORA40.8-201ENST00000411034 126 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 TRAJ51-201ENST00000504127 63 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-850P-201ENST00000516934 103 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-789P-201ENST00000517105 102 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 AC068339.1-201ENST00000526965 141 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 AL078603.1-201ENST00000603824 313 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-90P-201ENST00000606352 106 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 AC244669.1-204ENST00000621564 178 ntBASIC0.52□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-880P-201ENST00000384526 107 ntBASIC0.51□□□□□ -2.33
CLDN16Q9Y5I7 Y_RNA.563-201ENST00000384707 108 ntBASIC0.51□□□□□ -2.33
CLDN16Q9Y5I7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.51□□□□□ -2.33
CLDN16Q9Y5I7 RNA5SP227-201ENST00000516184 113 ntBASIC0.51□□□□□ -2.33
CLDN16Q9Y5I7 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
CLDN16Q9Y5I7 RNU6-313P-201ENST00000516317 112 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms