Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.692-201ENST00000516627 105 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 AC141557.1-201ENST00000540982 400 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 AC008608.1-201ENST00000603910 127 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.15□□□□□ -2.39
SHANK1Q9Y566 MIRLET7D-201ENST00000362263 87 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 RNU6-1184P-201ENST00000384588 108 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 RNU6-679P-201ENST00000391003 106 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 RNY4P20-201ENST00000516678 93 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 AC022559.1-201ENST00000520905 205 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 DEFB131E-201ENST00000532329 154 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 AC020891.4-201ENST00000605745 93 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 MIR3658-201ENST00000636291 56 ntBASIC0.14□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.240-201ENST00000364469 95 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 MIR224-201ENST00000384889 81 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 RNU7-137P-201ENST00000516788 62 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 RNU6-647P-201ENST00000364243 107 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 RNU6-312P-201ENST00000364629 107 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.343-201ENST00000365354 112 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 RNU6-460P-201ENST00000391158 108 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 MIR513C-201ENST00000401352 84 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 BX276092.1-201ENST00000427368 251 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 SNORA81.3-201ENST00000517283 198 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 U7.2-201ENST00000607576 63 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 AC004792.1-201ENST00000614523 137 ntBASIC0.13□□□□□ -2.39
SHANK1Q9Y566 MIR101-2-201ENST00000362195 79 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNU6-151P-201ENST00000364158 107 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 MIR635-201ENST00000384830 98 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 MIR214-201ENST00000385214 110 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 PCNPP3-201ENST00000393579 471 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 MIR548L-201ENST00000408303 86 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNU4-69P-201ENST00000410677 143 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNA5SP268-201ENST00000516828 124 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNU6-782P-201ENST00000516852 104 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNU6-182P-201ENST00000516970 105 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 MIR4676-201ENST00000583078 72 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNU6-865P-201ENST00000364772 107 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 RNU6-46P-201ENST00000383860 107 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 SNORA72.6-201ENST00000384520 129 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 AC097635.1-201ENST00000450678 155 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 MIR3144-201ENST00000579460 79 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 MIR548AE2-201ENST00000583456 67 ntBASIC0.12□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.49-201ENST00000362714 112 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 SNORD115-19-201ENST00000363098 82 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 SNORD115-18-201ENST00000363293 82 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 SNORD115-17-201ENST00000364612 82 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.272-201ENST00000364696 102 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 RNY1P2-201ENST00000364820 117 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.413-201ENST00000384007 102 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 RNU7-48P-201ENST00000458875 63 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.754-201ENST00000476024 102 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 MIR548AD-201ENST00000584780 82 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.790-201ENST00000614282 102 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.782-201ENST00000614695 102 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.337-201ENST00000365312 102 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.660-201ENST00000516002 120 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 AC007012.1-201ENST00000567192 175 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 AC087741.2-201ENST00000619415 172 ntBASIC0.11□□□□□ -2.39
SHANK1Q9Y566 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.423-201ENST00000384057 113 ntBASIC0.1□□□□□ -2.39
SHANK1Q9Y566 RNU6-80P-201ENST00000384195 107 ntBASIC0.1□□□□□ -2.39
SHANK1Q9Y566 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
SHANK1Q9Y566 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.1□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.56-201ENST00000362798 112 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 SNORD114-3-201ENST00000364969 75 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 SNORD116-18-201ENST00000383961 92 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.514-201ENST00000384528 112 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 RNU7-123P-201ENST00000515911 60 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 RNU6-138P-201ENST00000515952 107 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 RNU6-240P-201ENST00000516098 97 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 RN7SKP12-201ENST00000516275 143 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 SNORA25.16-201ENST00000516741 121 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.09□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.298-201ENST00000364960 107 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 MIR759-201ENST00000390224 91 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 SNORA75.1-201ENST00000391130 148 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 RNU7-120P-201ENST00000459334 63 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 RNU6-531P-201ENST00000516694 104 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 RNY1P9-201ENST00000532431 109 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 AC021753.1-201ENST00000635724 168 ntBASIC0.09□□□□□ -2.4
SHANK1Q9Y566 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.09□□□□□ -2.4
SHANK1Q9Y566 SNORD114-31-201ENST00000363219 75 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 RNU6-508P-201ENST00000363231 103 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.127-201ENST00000363386 109 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.233-201ENST00000364407 101 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 SNORD57-201ENST00000448188 72 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 RNU7-197P-201ENST00000458836 62 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 RNA5SP47-201ENST00000517230 109 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 TUG1_4.1-201ENST00000619464 181 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 MIR198-201ENST00000637333 62 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms