Protein–RNA interactions for Protein: Q9Y3Q3

TMED3, Transmembrane emp24 domain-containing protein 3, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3Q9Y3Q3 MIR3163-201ENST00000581592 73 ntBASIC0.3□□□□□ -2.36
TMED3Q9Y3Q3 RNU7-10P-201ENST00000607194 63 ntBASIC0.3□□□□□ -2.36
TMED3Q9Y3Q3 MIR7107-201ENST00000611489 80 ntBASIC0.3□□□□□ -2.36
TMED3Q9Y3Q3 AP001362.1-201ENST00000625165 124 ntBASIC0.3□□□□□ -2.36
TMED3Q9Y3Q3 AC091304.10-201ENST00000641554 121 ntBASIC0.3□□□□□ -2.36
TMED3Q9Y3Q3 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 Y_RNA.127-201ENST00000363386 109 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 SNORA63.5-201ENST00000363548 123 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 Y_RNA.170-201ENST00000363746 110 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 RNA5SP499-201ENST00000363982 119 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 Y_RNA.198-201ENST00000364013 98 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 Y_RNA.488-201ENST00000384403 102 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 AL158147.1-201ENST00000443970 75 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 RNU7-200P-201ENST00000516105 62 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 AC087741.2-201ENST00000619415 172 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
TMED3Q9Y3Q3 MT-TI-201ENST00000387365 69 ntBASIC0.28□□□□□ -2.36
TMED3Q9Y3Q3 SUMO1P3-201ENST00000439961 304 ntBASIC0.28□□□□□ -2.36
TMED3Q9Y3Q3 AC138869.1-201ENST00000568623 124 ntBASIC0.28□□□□□ -2.36
TMED3Q9Y3Q3 Y_RNA.213-201ENST00000364178 111 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 MIR6779-201ENST00000617283 64 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.27□□□□□ -2.37
TMED3Q9Y3Q3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 Y_RNA.294-201ENST00000364916 102 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNY1P5-201ENST00000383890 115 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 MIR548I2-201ENST00000408348 149 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-473P-201ENST00000516164 107 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-426P-201ENST00000516464 97 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU7-6P-201ENST00000516845 62 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 MIR924-201ENST00000638017 53 ntBASIC0.26□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-865P-201ENST00000364772 107 ntBASIC0.25□□□□□ -2.37
TMED3Q9Y3Q3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.25□□□□□ -2.37
TMED3Q9Y3Q3 MIR519A1-201ENST00000385257 85 ntBASIC0.25□□□□□ -2.37
TMED3Q9Y3Q3 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
TMED3Q9Y3Q3 MIR376B-201ENST00000614515 100 ntBASIC0.25□□□□□ -2.37
TMED3Q9Y3Q3 SNORD115-24-201ENST00000363528 82 ntBASIC0.24□□□□□ -2.37
TMED3Q9Y3Q3 MIR4500-201ENST00000579472 76 ntBASIC0.24□□□□□ -2.37
TMED3Q9Y3Q3 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
TMED3Q9Y3Q3 MIR635-201ENST00000384830 98 ntBASIC0.23□□□□□ -2.37
TMED3Q9Y3Q3 MIR759-201ENST00000390224 91 ntBASIC0.23□□□□□ -2.37
TMED3Q9Y3Q3 AC097635.1-201ENST00000450678 155 ntBASIC0.23□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-255P-201ENST00000516957 105 ntBASIC0.23□□□□□ -2.37
TMED3Q9Y3Q3 Y_RNA.773-201ENST00000607168 90 ntBASIC0.23□□□□□ -2.37
TMED3Q9Y3Q3 RNA5SP403-201ENST00000363598 108 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 Y_RNA.506-201ENST00000384494 102 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 Y_RNA.568-201ENST00000384742 113 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 MIR1263-201ENST00000408324 86 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 MTND4LP9-201ENST00000427694 174 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 AC069271.1-201ENST00000445577 156 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 TRAJ51-201ENST00000504127 63 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-781P-201ENST00000516377 101 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 RNU7-161P-201ENST00000517289 62 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
TMED3Q9Y3Q3 RNU6-726P-201ENST00000364680 107 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 Y_RNA.343-201ENST00000365354 112 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-716P-201ENST00000365621 103 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-571P-201ENST00000384128 107 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 MIR548I1-201ENST00000408810 149 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 RNA5SP272-201ENST00000516095 111 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 MIR8087-201ENST00000612745 78 ntBASIC0.21□□□□□ -2.38
TMED3Q9Y3Q3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 SNORD58C-201ENST00000365223 64 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 Y_RNA.528-201ENST00000384575 108 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 MIR34C-201ENST00000384831 77 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 MIR548D2-201ENST00000384955 97 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 SNORA40-201ENST00000388090 126 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-735P-201ENST00000410612 107 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-521P-201ENST00000516663 105 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-1234P-201ENST00000516877 103 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-170P-201ENST00000362832 104 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 BX276092.1-201ENST00000427368 251 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 MIR3668-201ENST00000582138 75 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 AL162376.1-201ENST00000624117 175 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 MIR1255B1-201ENST00000636325 63 ntBASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TMED3Q9Y3Q3 MIR330-201ENST00000362196 94 ntBASIC0.18□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
TMED3Q9Y3Q3 MIR599-201ENST00000385069 95 ntBASIC0.18□□□□□ -2.38
TMED3Q9Y3Q3 SNORD41.1-201ENST00000391000 69 ntBASIC0.18□□□□□ -2.38
TMED3Q9Y3Q3 RNU6-257P-201ENST00000410238 98 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms