Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 BX276092.1-201ENST00000427368 251 ntBASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 AC087499.7-201ENST00000441958 109 ntBASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 uc_338.6-201ENST00000613544 171 ntBASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 RNU6-654P-201ENST00000364373 107 ntBASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 RNU6-580P-201ENST00000365159 107 ntBASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 MIR1276-201ENST00000408707 83 ntBASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 MIR18B-201ENST00000454574 71 ntBASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RTCBQ9Y3I0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.09□□□□□ -2.07
RTCBQ9Y3I0 Y_RNA.316-201ENST00000365118 111 ntBASIC2.09□□□□□ -2.07
RTCBQ9Y3I0 SNORD4B-201ENST00000459083 72 ntBASIC2.09□□□□□ -2.07
RTCBQ9Y3I0 AC019176.1-201ENST00000518519 225 ntBASIC2.09□□□□□ -2.07
RTCBQ9Y3I0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 MIR1236-201ENST00000408340 102 ntBASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 RNA5SP95-201ENST00000410319 137 ntBASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 MIR3664-201ENST00000579074 99 ntBASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 MIR3937-201ENST00000580135 106 ntBASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.08□□□□□ -2.08
RTCBQ9Y3I0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 RNU6-53P-201ENST00000365367 106 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 SNORD93-201ENST00000408813 74 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 Y_RNA.648-201ENST00000459455 110 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 snoU13.18-201ENST00000459483 104 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 MIR4491-201ENST00000581087 68 ntBASIC2.07□□□□□ -2.08
RTCBQ9Y3I0 RNU4-58P-201ENST00000363192 141 ntBASIC2.06□□□□□ -2.08
RTCBQ9Y3I0 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
RTCBQ9Y3I0 AC140658.3-201ENST00000567603 271 ntBASIC2.06□□□□□ -2.08
RTCBQ9Y3I0 MIR6504-201ENST00000613520 61 ntBASIC2.06□□□□□ -2.08
RTCBQ9Y3I0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 Y_RNA.221-201ENST00000364248 96 ntBASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 SNORA67.6-201ENST00000391093 99 ntBASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 RNU6-531P-201ENST00000516694 104 ntBASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 AC019288.1-201ENST00000557918 224 ntBASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.05□□□□□ -2.08
RTCBQ9Y3I0 RNU4-32P-201ENST00000363404 141 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 SNORA7.1-201ENST00000363750 139 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 RNU1-36P-201ENST00000365130 165 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 RNU6-1254P-201ENST00000391266 104 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 RNU7-85P-201ENST00000458851 63 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 AC023790.1-201ENST00000482174 347 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 SNORA25.16-201ENST00000516741 121 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 RNU6-165P-201ENST00000517170 99 ntBASIC2.04□□□□□ -2.08
RTCBQ9Y3I0 SNORA72.6-201ENST00000384520 129 ntBASIC2.03□□□□□ -2.08
RTCBQ9Y3I0 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
RTCBQ9Y3I0 RNU7-153P-201ENST00000516455 62 ntBASIC2.03□□□□□ -2.08
RTCBQ9Y3I0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
RTCBQ9Y3I0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 SNORD36A-201ENST00000362874 73 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 Y_RNA.94-201ENST00000363068 106 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 RNU6-403P-201ENST00000363163 104 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 MIR516A2-201ENST00000384888 90 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 MIR516A1-201ENST00000385033 90 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 RNU6-243P-201ENST00000391140 107 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 MIR4662A-201ENST00000637499 67 ntBASIC2.02□□□□□ -2.09
RTCBQ9Y3I0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 RNU6-1296P-201ENST00000383879 107 ntBASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 MIR3198-2-201ENST00000577868 80 ntBASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 MIR4421-201ENST00000578133 69 ntBASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 AL161722.3-201ENST00000605789 2983 ntBASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 ZNF209P-201ENST00000593450 2304 ntBASIC2.01□□□□□ -2.09
RTCBQ9Y3I0 MIR517C-201ENST00000385103 95 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 RNU6-1054P-201ENST00000411293 104 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 RNU7-185P-201ENST00000459215 60 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 RNU6-1194P-201ENST00000516208 104 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 SNORA25.13-201ENST00000516395 103 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 RNU1-92P-201ENST00000517017 135 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 MIR4536-1-201ENST00000583537 88 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2□□□□□ -2.09
RTCBQ9Y3I0 AC023934.1-201ENST00000574529 2389 ntBASIC1.99□□□□□ -2.09
RTCBQ9Y3I0 snoU13.11-201ENST00000459219 104 ntBASIC1.99□□□□□ -2.09
RTCBQ9Y3I0 RNU6-65P-201ENST00000516332 98 ntBASIC1.99□□□□□ -2.09
RTCBQ9Y3I0 MIR4712-201ENST00000583750 82 ntBASIC1.99□□□□□ -2.09
RTCBQ9Y3I0 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
RTCBQ9Y3I0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RTCBQ9Y3I0 SNORD113.3-201ENST00000364630 78 ntBASIC1.98□□□□□ -2.09
RTCBQ9Y3I0 MIR1323-201ENST00000408090 73 ntBASIC1.98□□□□□ -2.09
RTCBQ9Y3I0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.98□□□□□ -2.09
RTCBQ9Y3I0 MIR1257-201ENST00000408490 117 ntBASIC1.98□□□□□ -2.09
RTCBQ9Y3I0 AL157834.3-201ENST00000615543 103 ntBASIC1.98□□□□□ -2.09
RTCBQ9Y3I0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.97□□□□□ -2.09
RTCBQ9Y3I0 SNORD63B-201ENST00000411005 70 ntBASIC1.97□□□□□ -2.09
RTCBQ9Y3I0 RNU1-123P-201ENST00000458950 160 ntBASIC1.97□□□□□ -2.09
RTCBQ9Y3I0 snoU13.21-201ENST00000459368 105 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms