Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AP003327.1-201ENST00000529684 127 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 AC138749.4-201ENST00000563970 127 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.773-201ENST00000607168 90 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.328-201ENST00000365208 113 ntBASIC1.13□□□□□ -2.23
CDK11AQ9UQ88 MIR573-201ENST00000384964 99 ntBASIC1.13□□□□□ -2.23
CDK11AQ9UQ88 AP001362.1-201ENST00000625165 124 ntBASIC1.13□□□□□ -2.23
CDK11AQ9UQ88 HSBP1P2-201ENST00000299671 229 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 RNU4-67P-201ENST00000364569 141 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 RNA5SP205-201ENST00000364653 136 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.353-201ENST00000365440 108 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.362-201ENST00000365518 110 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 MIR936-201ENST00000401264 98 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 MIR1912-201ENST00000410389 80 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 RNU2-51P-201ENST00000410708 197 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 RNU6-521P-201ENST00000516663 105 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 SNORA25.16-201ENST00000516741 121 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 AC011195.1-201ENST00000578177 177 ntBASIC1.12□□□□□ -2.23
CDK11AQ9UQ88 RNU6-363P-201ENST00000362895 105 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.119-201ENST00000363301 96 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.344-201ENST00000365381 112 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 RNU6-429P-201ENST00000384582 108 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 MIR548A1-201ENST00000385041 97 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 MIR146A-201ENST00000385201 99 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 AC008608.1-201ENST00000603910 127 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 AL590095.2-201ENST00000604136 117 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 MIR1255B1-201ENST00000636325 63 ntBASIC1.11□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.309-201ENST00000365046 111 ntBASIC1.1□□□□□ -2.23
CDK11AQ9UQ88 RNU6-1081P-201ENST00000384537 107 ntBASIC1.1□□□□□ -2.23
CDK11AQ9UQ88 RNU6-531P-201ENST00000516694 104 ntBASIC1.1□□□□□ -2.23
CDK11AQ9UQ88 AL162726.3-218ENST00000636401 95 ntBASIC1.1□□□□□ -2.23
CDK11AQ9UQ88 MIR101-2-201ENST00000362195 79 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 RNU6-834P-201ENST00000362367 110 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.85-201ENST00000363014 111 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.155-201ENST00000363632 101 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 RNA5SP117-201ENST00000365294 118 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 RNU4-45P-201ENST00000365469 141 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 RNU6-409P-201ENST00000384114 104 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 SNORD100-201ENST00000408573 76 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.697-201ENST00000516776 113 ntBASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.09□□□□□ -2.23
CDK11AQ9UQ88 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CDK11AQ9UQ88 SNORD38.2-201ENST00000384470 69 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 SNORA19-201ENST00000384737 128 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 RNU6-816P-201ENST00000390914 107 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1268P-201ENST00000391214 107 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1239P-201ENST00000391310 107 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 MTND5P34-201ENST00000568888 325 ntBASIC1.08□□□□□ -2.24
CDK11AQ9UQ88 RNU6-880P-201ENST00000384526 107 ntBASIC1.07□□□□□ -2.24
CDK11AQ9UQ88 SNORA7.5-201ENST00000410672 110 ntBASIC1.07□□□□□ -2.24
CDK11AQ9UQ88 AC002350.1-201ENST00000490759 375 ntBASIC1.07□□□□□ -2.24
CDK11AQ9UQ88 RNU6-412P-201ENST00000516434 106 ntBASIC1.07□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1018P-201ENST00000516577 106 ntBASIC1.07□□□□□ -2.24
CDK11AQ9UQ88 Y_RNA.174-201ENST00000363781 105 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 SNORD116-21-201ENST00000384507 92 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 RNU6-733P-201ENST00000410759 104 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 MIR3612-201ENST00000579753 87 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 MIR376B-201ENST00000614515 100 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 U2.22-201ENST00000636441 106 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 AL512310.12-203ENST00000640543 90 ntBASIC1.06□□□□□ -2.24
CDK11AQ9UQ88 Y_RNA.49-201ENST00000362714 112 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 SNORA63.5-201ENST00000363548 123 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 Y_RNA.360-201ENST00000365512 102 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 Y_RNA.536-201ENST00000384621 113 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 RNU6-476P-201ENST00000384726 107 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1064P-201ENST00000410626 104 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 MIR4500-201ENST00000579472 76 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1056P-201ENST00000383996 107 ntBASIC1.04□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1144P-201ENST00000384247 104 ntBASIC1.04□□□□□ -2.24
CDK11AQ9UQ88 MIR193B-201ENST00000384907 83 ntBASIC1.04□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1307P-201ENST00000391012 103 ntBASIC1.04□□□□□ -2.24
CDK11AQ9UQ88 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.04□□□□□ -2.24
CDK11AQ9UQ88 RNA5SP347-201ENST00000362445 119 ntBASIC1.03□□□□□ -2.24
CDK11AQ9UQ88 RNU6-535P-201ENST00000384722 107 ntBASIC1.03□□□□□ -2.24
CDK11AQ9UQ88 RNA5SP222-201ENST00000411039 105 ntBASIC1.03□□□□□ -2.24
CDK11AQ9UQ88 MIR4711-201ENST00000578274 70 ntBASIC1.03□□□□□ -2.24
CDK11AQ9UQ88 RNU6-1313P-201ENST00000362622 102 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 Y_RNA.56-201ENST00000362798 112 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 SNORD114-23-201ENST00000363536 72 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 RNU6-469P-201ENST00000516253 101 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 MIR548AI-201ENST00000579940 88 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 MIR548H5-201ENST00000580314 60 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 AL035470.1-201ENST00000622571 220 ntBASIC1.02□□□□□ -2.25
CDK11AQ9UQ88 Y_RNA.281-201ENST00000364774 94 ntBASIC1.01□□□□□ -2.25
CDK11AQ9UQ88 MIR34C-201ENST00000384831 77 ntBASIC1.01□□□□□ -2.25
CDK11AQ9UQ88 RNA5SP193-201ENST00000410353 107 ntBASIC1.01□□□□□ -2.25
CDK11AQ9UQ88 AC068339.1-201ENST00000526965 141 ntBASIC1.01□□□□□ -2.25
CDK11AQ9UQ88 MIR1273G-201ENST00000577677 100 ntBASIC1.01□□□□□ -2.25
CDK11AQ9UQ88 AC010487.4-201ENST00000637027 61 ntBASIC1.01□□□□□ -2.25
CDK11AQ9UQ88 Y_RNA.549-201ENST00000384657 102 ntBASIC1□□□□□ -2.25
CDK11AQ9UQ88 RNU6-679P-201ENST00000391003 106 ntBASIC1□□□□□ -2.25
CDK11AQ9UQ88 RNU6-135P-201ENST00000516769 101 ntBASIC1□□□□□ -2.25
CDK11AQ9UQ88 MIR18A-201ENST00000362310 71 ntBASIC0.99□□□□□ -2.25
CDK11AQ9UQ88 Y_RNA.273-201ENST00000364703 102 ntBASIC0.99□□□□□ -2.25
CDK11AQ9UQ88 RNU6-291P-201ENST00000384720 107 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms