Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.41□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-1194P-201ENST00000516208 104 ntBASIC1.41□□□□□ -2.18
CDC42EP3Q9UKI2 AC020891.4-201ENST00000605745 93 ntBASIC1.41□□□□□ -2.18
CDC42EP3Q9UKI2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-1125P-201ENST00000363601 107 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-934P-201ENST00000365154 107 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-480P-201ENST00000384332 107 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 RNU7-90P-201ENST00000459216 62 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 MIR4419B-201ENST00000577260 68 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 MIR4452-201ENST00000583004 71 ntBASIC1.4□□□□□ -2.19
CDC42EP3Q9UKI2 RNU4-58P-201ENST00000363192 141 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 SNORD48-201ENST00000364953 64 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 RNA5SP363-201ENST00000365072 115 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 MIR181B2-201ENST00000385004 89 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 MIR450A2-201ENST00000385022 100 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 RNY4P29-201ENST00000410801 97 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 SNORD83.1-201ENST00000411362 77 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 SNORA25.16-201ENST00000516741 121 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 RNA5SP480-201ENST00000516840 109 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-850P-201ENST00000516934 103 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 AC023934.1-201ENST00000574529 2389 ntBASIC1.39□□□□□ -2.19
CDC42EP3Q9UKI2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 Y_RNA.17-201ENST00000362433 111 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-820P-201ENST00000384273 107 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 MIR1257-201ENST00000408490 117 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 Y_RNA.593-201ENST00000410292 98 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 RNU4-83P-201ENST00000410863 133 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 RPS26P5-201ENST00000418544 335 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-531P-201ENST00000516694 104 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 AL513043.2-201ENST00000573941 143 ntBASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42EP3Q9UKI2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-369P-201ENST00000362515 102 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-1134P-201ENST00000365156 101 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-675P-201ENST00000384236 104 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 MIR125B2-201ENST00000385128 89 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-765P-201ENST00000516916 99 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 AC023827.1-201ENST00000569247 97 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 AC062037.1-201ENST00000605302 128 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 MIR6082-201ENST00000613604 109 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 MIR8066-201ENST00000617280 78 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 AC025521.1-201ENST00000621624 286 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.37□□□□□ -2.19
CDC42EP3Q9UKI2 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 SNORA7.1-201ENST00000363750 139 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-53P-201ENST00000365367 106 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 Y_RNA.388-201ENST00000383919 113 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 SNORD116-22-201ENST00000384430 92 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 SNORA26.2-201ENST00000390922 122 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 BX276092.1-201ENST00000427368 251 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 RNU7-40P-201ENST00000516397 64 ntBASIC1.36□□□□□ -2.19
CDC42EP3Q9UKI2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.35□□□□□ -2.19
CDC42EP3Q9UKI2 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-219P-201ENST00000364728 107 ntBASIC1.35□□□□□ -2.19
CDC42EP3Q9UKI2 MIR4771-2-201ENST00000577758 74 ntBASIC1.35□□□□□ -2.19
CDC42EP3Q9UKI2 MIR4771-1-201ENST00000582617 74 ntBASIC1.35□□□□□ -2.19
CDC42EP3Q9UKI2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-403P-201ENST00000363163 104 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-497P-201ENST00000365316 104 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 RNU6-1152P-201ENST00000384576 107 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 RN7SKP12-201ENST00000516275 143 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 MIR4676-201ENST00000583078 72 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 SNORD92-201ENST00000585078 85 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
CDC42EP3Q9UKI2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 Y_RNA.620-201ENST00000411009 88 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 MIR4668-201ENST00000582284 70 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 AC013244.2-201ENST00000603396 103 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
CDC42EP3Q9UKI2 SNORA25-201ENST00000384384 134 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 SNORA72.6-201ENST00000384520 129 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 SNORD100-201ENST00000408573 76 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 RNU6-402P-201ENST00000410678 103 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 AC015818.7-201ENST00000428754 109 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 AC087499.7-201ENST00000441958 109 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 RNA5SP102-201ENST00000516865 106 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
CDC42EP3Q9UKI2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 SNORD36A-201ENST00000362874 73 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 MIR519A1-201ENST00000385257 85 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 AL161932.1-201ENST00000437408 146 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 RNU7-156P-201ENST00000517214 74 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms