Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.49□□□□□ -2.33
HCN3Q9P1Z3 RNU6-907P-201ENST00000390924 102 ntBASIC0.49□□□□□ -2.33
HCN3Q9P1Z3 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
HCN3Q9P1Z3 RNU7-2P-201ENST00000516096 62 ntBASIC0.49□□□□□ -2.33
HCN3Q9P1Z3 MIR4500-201ENST00000579472 76 ntBASIC0.49□□□□□ -2.33
HCN3Q9P1Z3 MIR3163-201ENST00000581592 73 ntBASIC0.49□□□□□ -2.33
HCN3Q9P1Z3 RNU6-235P-201ENST00000362644 107 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 RNU6-865P-201ENST00000364772 107 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 RNA5SP136-201ENST00000410906 107 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 RNA5SP476-201ENST00000516613 103 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
HCN3Q9P1Z3 SNORA63.5-201ENST00000363548 123 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 SNORA8.2-201ENST00000384372 139 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 RNU6-429P-201ENST00000384582 108 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 MT-TI-201ENST00000387365 69 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 SNORA40-201ENST00000388090 126 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 MTND4LP9-201ENST00000427694 174 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 RNU6-1061P-201ENST00000516530 99 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 RNU6-135P-201ENST00000516769 101 ntBASIC0.47□□□□□ -2.33
HCN3Q9P1Z3 Y_RNA.198-201ENST00000364013 98 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 RNA5SP245-201ENST00000364239 121 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 SNORD115-35-201ENST00000365122 82 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.528-201ENST00000384575 108 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 RNU6-781P-201ENST00000516377 101 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 AC087741.2-201ENST00000619415 172 ntBASIC0.46□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 RNU6-1307P-201ENST00000391012 103 ntBASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 SUMO1P3-201ENST00000439961 304 ntBASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 AP001362.1-201ENST00000625165 124 ntBASIC0.45□□□□□ -2.34
HCN3Q9P1Z3 SNORA36.1-201ENST00000363424 132 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.506-201ENST00000384494 102 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.568-201ENST00000384742 113 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 MIR548H5-201ENST00000580314 60 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 RNY1P5-201ENST00000383890 115 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 RNU6-35P-201ENST00000384530 107 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 RNU6-257P-201ENST00000410238 98 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 RNU6-1211P-201ENST00000459179 105 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 HAR1A.1-201ENST00000459583 118 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 Y_RNA.773-201ENST00000607168 90 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
HCN3Q9P1Z3 SNORD28-201ENST00000384706 75 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 BX276092.1-201ENST00000427368 251 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 MIR4639-201ENST00000584938 69 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 AC025166.1-201ENST00000612411 163 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 MIR376B-201ENST00000614515 100 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 AC244669.1-204ENST00000621564 178 ntBASIC0.42□□□□□ -2.34
HCN3Q9P1Z3 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 MIR635-201ENST00000384830 98 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 MIR548I1-201ENST00000408810 149 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 RNU6-521P-201ENST00000516663 105 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 RNA5SP47-201ENST00000517230 109 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 AC138869.1-201ENST00000568623 124 ntBASIC0.41□□□□□ -2.34
HCN3Q9P1Z3 SNORD115-19-201ENST00000363098 82 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 SNORD115-18-201ENST00000363293 82 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 Y_RNA.127-201ENST00000363386 109 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 SNORD115-24-201ENST00000363528 82 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 SNORD115-17-201ENST00000364612 82 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 SNORD58C-201ENST00000365223 64 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 RNU6-735P-201ENST00000410612 107 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 MIR1255B1-201ENST00000636325 63 ntBASIC0.4□□□□□ -2.35
HCN3Q9P1Z3 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
HCN3Q9P1Z3 MT-TR-201ENST00000387439 65 ntBASIC0.39□□□□□ -2.35
HCN3Q9P1Z3 RNU6-1234P-201ENST00000516877 103 ntBASIC0.39□□□□□ -2.35
HCN3Q9P1Z3 AC091304.10-201ENST00000641554 121 ntBASIC0.39□□□□□ -2.35
HCN3Q9P1Z3 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 MIR539-201ENST00000365690 78 ntBASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 MIR34C-201ENST00000384831 77 ntBASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 MIR548D2-201ENST00000384955 97 ntBASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 SNORA7.5-201ENST00000410672 110 ntBASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 RNU6-971P-201ENST00000516920 106 ntBASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
HCN3Q9P1Z3 MTND5P18-201ENST00000445624 1801 ntBASIC0.37□□□□□ -2.35
HCN3Q9P1Z3 SNRPGP12-201ENST00000449481 213 ntBASIC0.37□□□□□ -2.35
HCN3Q9P1Z3 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
HCN3Q9P1Z3 MIR7107-201ENST00000611489 80 ntBASIC0.37□□□□□ -2.35
HCN3Q9P1Z3 RNU6-774P-201ENST00000363238 107 ntBASIC0.36□□□□□ -2.35
HCN3Q9P1Z3 RNY4P6-201ENST00000363667 96 ntBASIC0.36□□□□□ -2.35
HCN3Q9P1Z3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms