Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 Y_RNA.155-201ENST00000363632 101 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.261-201ENST00000364631 102 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 RNU6-409P-201ENST00000384114 104 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.507-201ENST00000384500 99 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 RNU6-816P-201ENST00000390914 107 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 RNU6-1268P-201ENST00000391214 107 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 RNU6-1239P-201ENST00000391310 107 ntBASIC0.6□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.226-201ENST00000364337 114 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 MIR548A3-201ENST00000385297 97 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 RNA5SP121-201ENST00000516537 101 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 RNU6-135P-201ENST00000516769 101 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 AL035470.1-201ENST00000622571 220 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 AL162726.3-218ENST00000636401 95 ntBASIC0.59□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 Y_RNA.549-201ENST00000384657 102 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 MIR635-201ENST00000384830 98 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 AL353813.1-201ENST00000440700 253 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 AC008267.6-201ENST00000441664 139 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 RPS29P1-201ENST00000465274 159 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 MIR4679-2-201ENST00000578358 77 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 RNU7-10P-201ENST00000607194 63 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 AL365222.1-201ENST00000614661 98 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 MIR6788-201ENST00000618842 66 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
LIN7CQ9NUP9 RNU6-1313P-201ENST00000362622 102 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 MIR1287-201ENST00000408492 90 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 RPL39P34-201ENST00000477141 156 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 AC138869.1-201ENST00000568623 124 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 AC132825.6-201ENST00000638861 357 ntBASIC0.57□□□□□ -2.32
LIN7CQ9NUP9 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 Y_RNA.353-201ENST00000365440 108 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 SNORD38.2-201ENST00000384470 69 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 SNORD28-201ENST00000384706 75 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 MIR548I2-201ENST00000408348 149 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 MIR1912-201ENST00000410389 80 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 RNA5SP247-201ENST00000411181 105 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 TRAJ51-201ENST00000504127 63 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 MTND5P40-201ENST00000559945 246 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 MIR151B-201ENST00000584249 96 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 AL670379.3-201ENST00000605040 251 ntBASIC0.56□□□□□ -2.32
LIN7CQ9NUP9 Y_RNA.49-201ENST00000362714 112 ntBASIC0.55□□□□□ -2.32
LIN7CQ9NUP9 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
LIN7CQ9NUP9 AC244505.6-201ENST00000452829 130 ntBASIC0.55□□□□□ -2.32
LIN7CQ9NUP9 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
LIN7CQ9NUP9 RNU6-1018P-201ENST00000516577 106 ntBASIC0.55□□□□□ -2.32
LIN7CQ9NUP9 MIR4639-201ENST00000584938 69 ntBASIC0.55□□□□□ -2.32
LIN7CQ9NUP9 Y_RNA.309-201ENST00000365046 111 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 RNU6-571P-201ENST00000384128 107 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 Y_RNA.563-201ENST00000384707 108 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 SNRPGP12-201ENST00000449481 213 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 RNU6-1006P-201ENST00000516998 103 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 RNA5SP47-201ENST00000517230 109 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 SNORA25.18-201ENST00000607153 114 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.54□□□□□ -2.32
LIN7CQ9NUP9 RNU6-170P-201ENST00000362832 104 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 RNU6-1117P-201ENST00000384525 104 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 RNU6-62P-201ENST00000516526 102 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 RNA5SP268-201ENST00000516828 124 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 RNU6-850P-201ENST00000516934 103 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
LIN7CQ9NUP9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
LIN7CQ9NUP9 Y_RNA.247-201ENST00000364500 92 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 RNU6-22P-201ENST00000384355 107 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 SNORD63B-201ENST00000411005 70 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 SPINT5P-201ENST00000448174 155 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
LIN7CQ9NUP9 SNORD38.1-201ENST00000363863 68 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 RNU6-1201P-201ENST00000384227 107 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 RNA5SP227-201ENST00000516184 113 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 RNA5SP220-201ENST00000516298 104 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 AC068339.1-201ENST00000526965 141 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.51□□□□□ -2.33
LIN7CQ9NUP9 SNORD118-201ENST00000363593 134 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 SNORD116-21-201ENST00000384507 92 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 MIR599-201ENST00000385069 95 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms