Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-257P-201ENST00000410238 98 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 RNA5SP193-201ENST00000410353 107 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-781P-201ENST00000516377 101 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 Y_RNA.328-201ENST00000365208 113 ntBASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 Y_RNA.528-201ENST00000384575 108 ntBASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-1307P-201ENST00000391012 103 ntBASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 MIR4639-201ENST00000584938 69 ntBASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-235P-201ENST00000362644 107 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 SNORA36.1-201ENST00000363424 132 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 SNORD58C-201ENST00000365223 64 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 MIR548H5-201ENST00000580314 60 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 SNORA25.18-201ENST00000607153 114 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 RNU7-10P-201ENST00000607194 63 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
SLC6A13Q9NSD5 Y_RNA.127-201ENST00000363386 109 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 RNA5SP245-201ENST00000364239 121 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 MIR539-201ENST00000365690 78 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 MT-TR-201ENST00000387439 65 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 RNA5SP47-201ENST00000517230 109 ntBASIC0.43□□□□□ -2.34
SLC6A13Q9NSD5 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 SNORA63.5-201ENST00000363548 123 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 SNORD28-201ENST00000384706 75 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-1061P-201ENST00000516530 99 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 RNA5SP268-201ENST00000516828 124 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 MIR4500-201ENST00000579472 76 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 Y_RNA.773-201ENST00000607168 90 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 AC025166.1-201ENST00000612411 163 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 MIR376B-201ENST00000614515 100 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 MIR6828-201ENST00000636181 60 ntBASIC0.42□□□□□ -2.34
SLC6A13Q9NSD5 MIR548D2-201ENST00000384955 97 ntBASIC0.41□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-735P-201ENST00000410612 107 ntBASIC0.41□□□□□ -2.34
SLC6A13Q9NSD5 AC244505.6-201ENST00000452829 130 ntBASIC0.41□□□□□ -2.34
SLC6A13Q9NSD5 Y_RNA.703-201ENST00000516846 111 ntBASIC0.41□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-1234P-201ENST00000516877 103 ntBASIC0.41□□□□□ -2.34
SLC6A13Q9NSD5 AC138869.1-201ENST00000568623 124 ntBASIC0.41□□□□□ -2.34
SLC6A13Q9NSD5 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-772P-201ENST00000516042 105 ntBASIC0.4□□□□□ -2.35
SLC6A13Q9NSD5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-1062P-201ENST00000383908 107 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 Y_RNA.586-201ENST00000391146 98 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 MIR548I2-201ENST00000408348 149 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 SUMO1P3-201ENST00000439961 304 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-1211P-201ENST00000459179 105 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-521P-201ENST00000516663 105 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 AC244669.1-204ENST00000621564 178 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 AC091304.10-201ENST00000641554 121 ntBASIC0.39□□□□□ -2.35
SLC6A13Q9NSD5 MTND5P18-201ENST00000445624 1801 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 RNY4P6-201ENST00000363667 96 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 Y_RNA.346-201ENST00000365385 112 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 SNORD50.2-201ENST00000365465 70 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 Y_RNA.360-201ENST00000365512 102 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 MIR635-201ENST00000384830 98 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 RNA5SP227-201ENST00000516184 113 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 MIR7107-201ENST00000611489 80 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 MIR1255B1-201ENST00000636325 63 ntBASIC0.38□□□□□ -2.35
SLC6A13Q9NSD5 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-1099P-201ENST00000363533 107 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 MIR34C-201ENST00000384831 77 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 BX276092.1-201ENST00000427368 251 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 MIR3133-201ENST00000583157 78 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
SLC6A13Q9NSD5 SNORD115-24-201ENST00000363528 82 ntBASIC0.36□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-746P-201ENST00000384112 109 ntBASIC0.36□□□□□ -2.35
SLC6A13Q9NSD5 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
SLC6A13Q9NSD5 SNORD38.2-201ENST00000384470 69 ntBASIC0.36□□□□□ -2.35
SLC6A13Q9NSD5 TRAJ51-201ENST00000504127 63 ntBASIC0.36□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-971P-201ENST00000516920 106 ntBASIC0.36□□□□□ -2.35
SLC6A13Q9NSD5 AL157777.2-201ENST00000258070 137 ntBASIC0.35□□□□□ -2.35
SLC6A13Q9NSD5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.35□□□□□ -2.35
SLC6A13Q9NSD5 RNU4-67P-201ENST00000364569 141 ntBASIC0.35□□□□□ -2.35
SLC6A13Q9NSD5 RNU6-571P-201ENST00000384128 107 ntBASIC0.35□□□□□ -2.35
SLC6A13Q9NSD5 RNU2-59P-201ENST00000410482 191 ntBASIC0.35□□□□□ -2.35
SLC6A13Q9NSD5 AC097635.1-201ENST00000450678 155 ntBASIC0.35□□□□□ -2.35
SLC6A13Q9NSD5 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-80P-201ENST00000384195 107 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 MIR519A1-201ENST00000385257 85 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.630-201ENST00000411370 108 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 SNRPGP12-201ENST00000449481 213 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
SLC6A13Q9NSD5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms