Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 RNU2-59P-201ENST00000410482 191 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 RNU7-200P-201ENST00000516105 62 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 RNA5SP268-201ENST00000516828 124 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 MTND5P41-201ENST00000517498 206 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 IGKV1-22-201ENST00000524313 326 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 AC138869.1-201ENST00000568623 124 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 MIR3163-201ENST00000581592 73 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 AC105081.1-201ENST00000617727 106 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 TUG1_4.1-201ENST00000619464 181 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 AC021753.1-201ENST00000635724 168 ntBASIC0.37□□□□□ -2.35
PCDHB16Q9NRJ7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
PCDHB16Q9NRJ7 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
PCDHB16Q9NRJ7 AC087741.2-201ENST00000619415 172 ntBASIC0.36□□□□□ -2.35
PCDHB16Q9NRJ7 AP001362.1-201ENST00000625165 124 ntBASIC0.36□□□□□ -2.35
PCDHB16Q9NRJ7 Y_RNA.127-201ENST00000363386 109 ntBASIC0.35□□□□□ -2.35
PCDHB16Q9NRJ7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.35□□□□□ -2.35
PCDHB16Q9NRJ7 RNY1P5-201ENST00000383890 115 ntBASIC0.35□□□□□ -2.35
PCDHB16Q9NRJ7 MIR548I2-201ENST00000408348 149 ntBASIC0.35□□□□□ -2.35
PCDHB16Q9NRJ7 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
PCDHB16Q9NRJ7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.34□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.34□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.213-201ENST00000364178 111 ntBASIC0.34□□□□□ -2.36
PCDHB16Q9NRJ7 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.448-201ENST00000384185 108 ntBASIC0.34□□□□□ -2.36
PCDHB16Q9NRJ7 RNU6-616P-201ENST00000384353 107 ntBASIC0.34□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
PCDHB16Q9NRJ7 RNA5SP245-201ENST00000364239 121 ntBASIC0.33□□□□□ -2.36
PCDHB16Q9NRJ7 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
PCDHB16Q9NRJ7 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
PCDHB16Q9NRJ7 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
PCDHB16Q9NRJ7 AC244669.1-204ENST00000621564 178 ntBASIC0.33□□□□□ -2.36
PCDHB16Q9NRJ7 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.343-201ENST00000365354 112 ntBASIC0.32□□□□□ -2.36
PCDHB16Q9NRJ7 SNRPGP12-201ENST00000449481 213 ntBASIC0.32□□□□□ -2.36
PCDHB16Q9NRJ7 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
PCDHB16Q9NRJ7 RNU7-6P-201ENST00000516845 62 ntBASIC0.32□□□□□ -2.36
PCDHB16Q9NRJ7 RNA5SP457-201ENST00000363657 124 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 RNU6-865P-201ENST00000364772 107 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 MIR635-201ENST00000384830 98 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 MIR519A1-201ENST00000385257 85 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 RNA5SP227-201ENST00000516184 113 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 MIR4500-201ENST00000579472 76 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 MIR7107-201ENST00000611489 80 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
PCDHB16Q9NRJ7 SNORA63.5-201ENST00000363548 123 ntBASIC0.3□□□□□ -2.36
PCDHB16Q9NRJ7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
PCDHB16Q9NRJ7 MT-TI-201ENST00000387365 69 ntBASIC0.3□□□□□ -2.36
PCDHB16Q9NRJ7 SUMO1P3-201ENST00000439961 304 ntBASIC0.3□□□□□ -2.36
PCDHB16Q9NRJ7 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.29□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.29□□□□□ -2.36
PCDHB16Q9NRJ7 RNU6-426P-201ENST00000516464 97 ntBASIC0.29□□□□□ -2.36
PCDHB16Q9NRJ7 MIR3668-201ENST00000582138 75 ntBASIC0.29□□□□□ -2.36
PCDHB16Q9NRJ7 Y_RNA.568-201ENST00000384742 113 ntBASIC0.28□□□□□ -2.36
PCDHB16Q9NRJ7 SNORA40-201ENST00000388090 126 ntBASIC0.28□□□□□ -2.36
PCDHB16Q9NRJ7 RNU6-1307P-201ENST00000391012 103 ntBASIC0.28□□□□□ -2.36
PCDHB16Q9NRJ7 MIR1263-201ENST00000408324 86 ntBASIC0.28□□□□□ -2.36
PCDHB16Q9NRJ7 MIR376B-201ENST00000614515 100 ntBASIC0.28□□□□□ -2.36
PCDHB16Q9NRJ7 SNORD115-24-201ENST00000363528 82 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-571P-201ENST00000384128 107 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.506-201ENST00000384494 102 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 MIR548I1-201ENST00000408810 149 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 MTND4LP9-201ENST00000427694 174 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 AC097635.1-201ENST00000450678 155 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-255P-201ENST00000516957 105 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 RNA5SP330-201ENST00000517096 96 ntBASIC0.27□□□□□ -2.37
PCDHB16Q9NRJ7 MIR330-201ENST00000362196 94 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 RNA5SP403-201ENST00000363598 108 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 RNY4P6-201ENST00000363667 96 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 SNORD38.2-201ENST00000384470 69 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.528-201ENST00000384575 108 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-521P-201ENST00000516663 105 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.773-201ENST00000607168 90 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-726P-201ENST00000364680 107 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 MIR539-201ENST00000365690 78 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 MIR548D2-201ENST00000384955 97 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 MIR1197-201ENST00000408818 88 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
PCDHB16Q9NRJ7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
PCDHB16Q9NRJ7 AC069271.1-201ENST00000445577 156 ntBASIC0.24□□□□□ -2.37
PCDHB16Q9NRJ7 TRAJ51-201ENST00000504127 63 ntBASIC0.24□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-781P-201ENST00000516377 101 ntBASIC0.24□□□□□ -2.37
PCDHB16Q9NRJ7 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-170P-201ENST00000362832 104 ntBASIC0.23□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-363P-201ENST00000362895 105 ntBASIC0.23□□□□□ -2.37
PCDHB16Q9NRJ7 SNORD58C-201ENST00000365223 64 ntBASIC0.23□□□□□ -2.37
PCDHB16Q9NRJ7 Y_RNA.346-201ENST00000365385 112 ntBASIC0.23□□□□□ -2.37
PCDHB16Q9NRJ7 RNU6-907P-201ENST00000390924 102 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms