Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 RNU6-934P-201ENST00000365154 107 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 SNORD93-201ENST00000408813 74 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.601-201ENST00000410500 113 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 RNU7-185P-201ENST00000459215 60 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 AP001318.4-201ENST00000616637 121 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 AC023934.1-201ENST00000574529 2389 ntBASIC1.2□□□□□ -2.22
ARHGEF3Q9NR81 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 RNY1P2-201ENST00000364820 117 ntBASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 RNU1-36P-201ENST00000365130 165 ntBASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 MIR4491-201ENST00000581087 68 ntBASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 U6.109-201ENST00000636749 87 ntBASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 AC091304.10-201ENST00000641554 121 ntBASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
ARHGEF3Q9NR81 RNA5SP133-201ENST00000363368 119 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.348-201ENST00000365403 103 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 SNORD12-201ENST00000391002 90 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.588-201ENST00000391254 102 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 SCARNA23-201ENST00000516060 130 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 MIR4771-2-201ENST00000577758 74 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 MIR4771-1-201ENST00000582617 74 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 AC020891.4-201ENST00000605745 93 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.818-201ENST00000618813 71 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 AP001362.1-201ENST00000625165 124 ntBASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.18□□□□□ -2.22
ARHGEF3Q9NR81 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.10-201ENST00000362371 110 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 RNU6-369P-201ENST00000362515 102 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 RNU6-905P-201ENST00000384434 107 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.544-201ENST00000384650 113 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 RNU6-795P-201ENST00000516323 103 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 AC012531.4-201ENST00000616509 177 ntBASIC1.17□□□□□ -2.22
ARHGEF3Q9NR81 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.119-201ENST00000363301 96 ntBASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 SNORD38.1-201ENST00000363863 68 ntBASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 Y_RNA.677-201ENST00000516401 85 ntBASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 SNORA25.16-201ENST00000516741 121 ntBASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 MIR548Z-201ENST00000584743 97 ntBASIC1.16□□□□□ -2.22
ARHGEF3Q9NR81 RNU6-170P-201ENST00000362832 104 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-640P-201ENST00000363693 105 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.205-201ENST00000364128 113 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 MIR1257-201ENST00000408490 117 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.659-201ENST00000515994 113 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 MIR4500-201ENST00000579472 76 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 AC090897.1-201ENST00000580909 226 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 MIR4777-201ENST00000583710 86 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 AC096720.1-201ENST00000604441 183 ntBASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.15□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-1298P-201ENST00000362456 101 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.93-201ENST00000363066 109 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-994P-201ENST00000410507 111 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 RNU4-83P-201ENST00000410863 133 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 AC109327.2-201ENST00000448339 378 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 RNA5SP436-201ENST00000516020 115 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-531P-201ENST00000516694 104 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.95-201ENST00000363079 95 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.107-201ENST00000363190 121 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-1163P-201ENST00000364516 107 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 SNORD45B-201ENST00000364617 72 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 MTATP8P2-201ENST00000435212 202 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 SNORA40.13-201ENST00000516379 120 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-90P-201ENST00000606352 106 ntBASIC1.13□□□□□ -2.23
ARHGEF3Q9NR81 HSBP1P2-201ENST00000299671 229 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.13-201ENST00000362403 112 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.467-201ENST00000384297 102 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 SNORD38.2-201ENST00000384470 69 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 SNORA72.6-201ENST00000384520 129 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 AC004941.2-201ENST00000427009 228 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 SPINT5P-201ENST00000448174 155 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-158P-201ENST00000517104 100 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
ARHGEF3Q9NR81 Y_RNA.173-201ENST00000363776 113 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 RNU7-156P-201ENST00000517214 74 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 MTND5P40-201ENST00000559945 246 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 MIR5000-201ENST00000577717 103 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 MIR4804-201ENST00000581683 73 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-86P-201ENST00000606534 107 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 MIR8066-201ENST00000617280 78 ntBASIC1.11□□□□□ -2.23
ARHGEF3Q9NR81 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ARHGEF3Q9NR81 MIR100-201ENST00000385259 80 ntBASIC1.1□□□□□ -2.23
ARHGEF3Q9NR81 RNU6-644P-201ENST00000391155 98 ntBASIC1.1□□□□□ -2.23
ARHGEF3Q9NR81 MIR1827-201ENST00000408549 66 ntBASIC1.1□□□□□ -2.23
ARHGEF3Q9NR81 BX276092.1-201ENST00000427368 251 ntBASIC1.1□□□□□ -2.23
ARHGEF3Q9NR81 RNU7-61P-201ENST00000515897 61 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 297.7 ms