Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR18B-201ENST00000454574 71 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 RNU7-85P-201ENST00000458851 63 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 snoU13.11-201ENST00000459219 104 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 AC093729.1-201ENST00000513074 128 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 AC008163.1-202ENST00000636004 2889 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 RNU4-58P-201ENST00000363192 141 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 SNORD115-37-201ENST00000363768 82 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 RNU6-279P-201ENST00000391297 101 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 RNU7-185P-201ENST00000459215 60 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 RNU7-106P-201ENST00000459514 67 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 AC013244.2-201ENST00000603396 103 ntBASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SEC61A2Q9H9S3 SNORA75.2-201ENST00000391138 150 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 SNORA75.3-201ENST00000391231 150 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 MIR1257-201ENST00000408490 117 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 SNORA31.2-201ENST00000516019 134 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 AC023827.1-201ENST00000569247 97 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
SEC61A2Q9H9S3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
SEC61A2Q9H9S3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 RNA5SP432-201ENST00000362480 116 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 SNORD36A-201ENST00000362874 73 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-934P-201ENST00000365154 107 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-243P-201ENST00000391140 107 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 MIR4771-2-201ENST00000577758 74 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 MIR4771-1-201ENST00000582617 74 ntBASIC1.46□□□□□ -2.18
SEC61A2Q9H9S3 MIR101-2-201ENST00000362195 79 ntBASIC1.45□□□□□ -2.18
SEC61A2Q9H9S3 SNORD113.3-201ENST00000364630 78 ntBASIC1.45□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.45□□□□□ -2.18
SEC61A2Q9H9S3 MIR1236-201ENST00000408340 102 ntBASIC1.45□□□□□ -2.18
SEC61A2Q9H9S3 SNORD100-201ENST00000408573 76 ntBASIC1.45□□□□□ -2.18
SEC61A2Q9H9S3 SNORD63B-201ENST00000411005 70 ntBASIC1.45□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-24P-201ENST00000384440 107 ntBASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 AC140658.3-201ENST00000567603 271 ntBASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 MIR4536-1-201ENST00000583537 88 ntBASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 AL353997.5-201ENST00000618886 171 ntBASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.44□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 TRAJ51-201ENST00000504127 63 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-65P-201ENST00000516332 98 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 SNORA25.13-201ENST00000516395 103 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 MIR3198-2-201ENST00000577868 80 ntBASIC1.43□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 MIR635-201ENST00000384830 98 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 RNU7-195P-201ENST00000458793 62 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 AC008834.1-201ENST00000511612 175 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 RNU7-40P-201ENST00000516397 64 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-957P-201ENST00000363652 99 ntBASIC1.41□□□□□ -2.18
SEC61A2Q9H9S3 Y_RNA.283-201ENST00000364798 112 ntBASIC1.41□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
SEC61A2Q9H9S3 RNA5SP292-201ENST00000390974 118 ntBASIC1.41□□□□□ -2.18
SEC61A2Q9H9S3 MIR889-201ENST00000401280 79 ntBASIC1.41□□□□□ -2.18
SEC61A2Q9H9S3 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
SEC61A2Q9H9S3 RNU6-132P-201ENST00000383863 107 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-811P-201ENST00000384069 107 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 MIR125B2-201ENST00000385128 89 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-466P-201ENST00000391224 103 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 AL450471.1-201ENST00000447509 127 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 RNU7-156P-201ENST00000517214 74 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 MIR4255-201ENST00000579351 72 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 MIR4712-201ENST00000583750 82 ntBASIC1.4□□□□□ -2.19
SEC61A2Q9H9S3 MIRLET7F1-201ENST00000362202 87 ntBASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-482P-201ENST00000391068 107 ntBASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 AL591704.2-201ENST00000421658 181 ntBASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-75P-201ENST00000515944 104 ntBASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 MIR4796-201ENST00000580742 81 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms