Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MIR516A1-201ENST00000385033 90 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 AC023790.1-201ENST00000482174 347 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 SNORD111.1-201ENST00000516421 86 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 SNORA18.5-201ENST00000516616 101 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 AL512310.8-201ENST00000550183 120 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 MIR3064-201ENST00000581130 66 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 MIR4484-201ENST00000582855 83 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 AL096861.1-201ENST00000610899 123 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 MIR7843-201ENST00000622274 79 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 AC008163.1-202ENST00000636004 2889 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
VPS11Q9H270 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 MIR1265-201ENST00000408444 86 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 RNU7-106P-201ENST00000459514 67 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 FGF7P7-201ENST00000514120 227 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 RNA5SP182-201ENST00000516064 82 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 MIR664A-201ENST00000626086 82 ntBASIC1.67□□□□□ -2.14
VPS11Q9H270 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS11Q9H270 Y_RNA.283-201ENST00000364798 112 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 Y_RNA.386-201ENST00000383913 105 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 RNU6-411P-201ENST00000384451 107 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 SNORA72.6-201ENST00000384520 129 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 MIR583-201ENST00000384846 75 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 RNU6-687P-201ENST00000516443 89 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 MIR3664-201ENST00000579074 99 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 AC104996.3-201ENST00000590718 94 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 GHRLOS.1-201ENST00000610995 70 ntBASIC1.66□□□□□ -2.14
VPS11Q9H270 RNA5SP48-201ENST00000363969 126 ntBASIC1.65□□□□□ -2.15
VPS11Q9H270 RNU6-922P-201ENST00000516753 99 ntBASIC1.65□□□□□ -2.15
VPS11Q9H270 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
VPS11Q9H270 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
VPS11Q9H270 MIRLET7F1-201ENST00000362202 87 ntBASIC1.64□□□□□ -2.15
VPS11Q9H270 SNORA25.3-201ENST00000363205 127 ntBASIC1.64□□□□□ -2.15
VPS11Q9H270 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
VPS11Q9H270 RNU6-448P-201ENST00000517052 107 ntBASIC1.64□□□□□ -2.15
VPS11Q9H270 MIR4536-1-201ENST00000583537 88 ntBASIC1.64□□□□□ -2.15
VPS11Q9H270 AL357312.1-201ENST00000603879 298 ntBASIC1.64□□□□□ -2.15
VPS11Q9H270 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
VPS11Q9H270 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
VPS11Q9H270 RNU6-1254P-201ENST00000391266 104 ntBASIC1.63□□□□□ -2.15
VPS11Q9H270 RNU6-1165P-201ENST00000410119 107 ntBASIC1.63□□□□□ -2.15
VPS11Q9H270 AC074348.1-201ENST00000426503 132 ntBASIC1.63□□□□□ -2.15
VPS11Q9H270 RNU6-634P-201ENST00000459134 106 ntBASIC1.63□□□□□ -2.15
VPS11Q9H270 Y_RNA.660-201ENST00000516002 120 ntBASIC1.63□□□□□ -2.15
VPS11Q9H270 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
VPS11Q9H270 RNU6-957P-201ENST00000363652 99 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 Y_RNA.491-201ENST00000384417 107 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 SNORD77.2-201ENST00000391045 68 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 Y_RNA.588-201ENST00000391254 102 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 SNORA25.16-201ENST00000516741 121 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 AP003716.2-201ENST00000528260 108 ntBASIC1.62□□□□□ -2.15
VPS11Q9H270 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS11Q9H270 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS11Q9H270 RNU6-70P-201ENST00000516438 60 ntBASIC1.61□□□□□ -2.15
VPS11Q9H270 RNU6-531P-201ENST00000516694 104 ntBASIC1.61□□□□□ -2.15
VPS11Q9H270 RNU6-295P-201ENST00000516901 104 ntBASIC1.61□□□□□ -2.15
VPS11Q9H270 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.61□□□□□ -2.15
VPS11Q9H270 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
VPS11Q9H270 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS11Q9H270 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS11Q9H270 RNU6-208P-201ENST00000362431 107 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 RNU6-243P-201ENST00000391140 107 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS11Q9H270 SNORD63B-201ENST00000411005 70 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 snoU13.17-201ENST00000458802 104 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 RNU7-62P-201ENST00000458856 62 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 RN7SKP88-201ENST00000516847 250 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 MIR4491-201ENST00000581087 68 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 MIR4524B-201ENST00000581569 115 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 MIR4264-201ENST00000583520 66 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 7SK.8-201ENST00000612110 250 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 7SK.11-201ENST00000615477 250 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 7SK.13-201ENST00000622040 250 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 MIR6516-201ENST00000630554 81 ntBASIC1.6□□□□□ -2.15
VPS11Q9H270 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VPS11Q9H270 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 SNORA25.9-201ENST00000365087 128 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 Y_RNA.340-201ENST00000365330 92 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 RNU6-540P-201ENST00000384622 101 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 MIR518E-201ENST00000385252 88 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 MIR764-201ENST00000390811 85 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 MIR1185-1-201ENST00000408598 86 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 RNA5SP95-201ENST00000410319 137 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 AL606490.4-201ENST00000423117 127 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 SNORD92-201ENST00000585078 85 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 MIR6845-201ENST00000613182 61 ntBASIC1.59□□□□□ -2.15
VPS11Q9H270 RNU6-330P-201ENST00000363015 107 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-396P-201ENST00000365369 105 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 MT-TN-201ENST00000387400 73 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-466P-201ENST00000391224 103 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-380P-201ENST00000410207 107 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 AC015818.7-201ENST00000428754 109 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 snoU13.23-201ENST00000458863 104 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 MIR2113-201ENST00000459007 91 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-871P-201ENST00000516122 100 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-807P-201ENST00000516805 107 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms