Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 MIR206-201ENST00000384872 86 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNU4-69P-201ENST00000410677 143 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNU7-13P-201ENST00000516413 62 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 AC138907.4-201ENST00000570107 226 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 U6.104-201ENST00000637979 90 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 RNU1-141P-201ENST00000364623 158 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 MIR587-201ENST00000384845 96 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 MIR548P-201ENST00000408336 84 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 MIR1302-6-201ENST00000408466 90 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 SNORD126-201ENST00000459475 77 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 MIR4680-201ENST00000580906 66 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 MIR3171-201ENST00000584270 74 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 AL359881.1-201ENST00000602916 267 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 AC021443.1-201ENST00000604478 211 ntBASIC-0.51□□□□□ -2.49
SHANK3Q9BYB0 MIR655-201ENST00000362159 97 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 RNU6-818P-201ENST00000364837 108 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 AL442663.2-201ENST00000554385 511 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 AC009779.6-201ENST00000603972 165 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 AL670379.3-201ENST00000605040 251 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 MIR6507-201ENST00000613630 70 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 MIR4320-201ENST00000636981 65 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 RNU4-84P-201ENST00000364200 139 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 RNU6-643P-201ENST00000384018 107 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 AP001362.1-201ENST00000625165 124 ntBASIC-0.52□□□□□ -2.49
SHANK3Q9BYB0 MIR20A-201ENST00000362279 71 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 SNORD2-201ENST00000459163 69 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 RNU2-35P-201ENST00000516446 142 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 MTND5P40-201ENST00000559945 246 ntBASIC-0.53□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 RNU6-571P-201ENST00000384128 107 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 SNORD63B-201ENST00000411005 70 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 AC244250.2-201ENST00000418731 148 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 AC093423.1-201ENST00000440817 142 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 RNA5SP484-201ENST00000458857 111 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 RNU7-2P-201ENST00000516096 62 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 MIR548AE2-201ENST00000583456 67 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 U2.14-201ENST00000615943 113 ntBASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.54□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 SNORD18B-201ENST00000365659 72 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MIR216B-201ENST00000390186 82 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MIR1270-201ENST00000459320 83 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 RNU7-188P-201ENST00000517063 64 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 AL391099.1-201ENST00000624635 187 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MIR365A-201ENST00000362260 87 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 SNORA32-201ENST00000384072 121 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 SNORD77B-201ENST00000391112 67 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MTND1P19-201ENST00000511780 315 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 RNU7-123P-201ENST00000515911 60 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MIR4643-201ENST00000577473 78 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 MIR3646-201ENST00000578301 84 ntBASIC-0.55□□□□□ -2.5
SHANK3Q9BYB0 RNU6-170P-201ENST00000362832 104 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 SNORD115-44-201ENST00000365391 82 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 RNU7-195P-201ENST00000458793 62 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 RNU6-240P-201ENST00000516098 97 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 YWHAEP2-201ENST00000580066 112 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 RNU2-4P-201ENST00000606190 192 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 MTND4P29-201ENST00000503122 1372 ntBASIC-0.56□□□□□ -2.5
SHANK3Q9BYB0 SNORA33.2-201ENST00000365413 134 ntBASIC-0.57□□□□□ -2.5
SHANK3Q9BYB0 RNU7-164P-201ENST00000459221 62 ntBASIC-0.57□□□□□ -2.5
SHANK3Q9BYB0 AC114755.3-201ENST00000481111 251 ntBASIC-0.57□□□□□ -2.5
SHANK3Q9BYB0 AL590491.3-201ENST00000610731 82 ntBASIC-0.57□□□□□ -2.5
SHANK3Q9BYB0 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 RNY4P28-201ENST00000365281 93 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 MIR519E-201ENST00000385075 84 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 RNU6-635P-201ENST00000516651 102 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 MIR6844-201ENST00000637122 62 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 RNU6-639P-201ENST00000384074 107 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 RNY3P16-201ENST00000516338 101 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 AC020661.2-201ENST00000560114 134 ntBASIC-0.58□□□□□ -2.5
SHANK3Q9BYB0 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms