Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU7-2P-201ENST00000516096 62 ntBASIC0.65□□□□□ -2.31
RTP3Q9BQQ7 RNU6-531P-201ENST00000516694 104 ntBASIC0.65□□□□□ -2.31
RTP3Q9BQQ7 RNU6-448P-201ENST00000517052 107 ntBASIC0.65□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 RNY4P6-201ENST00000363667 96 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 SNORD115-35-201ENST00000365122 82 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 RNU6-1307P-201ENST00000391012 103 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.712-201ENST00000517011 92 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 MIR3612-201ENST00000579753 87 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 MIR3910-1-201ENST00000580936 111 ntBASIC0.64□□□□□ -2.31
RTP3Q9BQQ7 SNORD115-19-201ENST00000363098 82 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD115-18-201ENST00000363293 82 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD115-17-201ENST00000364612 82 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 RNY1P2-201ENST00000364820 117 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD116-14-201ENST00000383894 92 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD116-17-201ENST00000383929 92 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD116-15-201ENST00000384445 92 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD116-19-201ENST00000384729 92 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 MIR548D2-201ENST00000384955 97 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 SNORD100-201ENST00000408573 76 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 RNU7-48P-201ENST00000458875 63 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 AC002350.1-201ENST00000490759 375 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 RNU6-1333P-201ENST00000516162 93 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 MIR1255B1-201ENST00000636325 63 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 MIR3914-2-201ENST00000637339 95 ntBASIC0.63□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 RNU4-58P-201ENST00000363192 141 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.127-201ENST00000363386 109 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 RNA5SP117-201ENST00000365294 118 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 RNA5SP476-201ENST00000516613 103 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 RNU6-521P-201ENST00000516663 105 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 RNU6-765P-201ENST00000516916 99 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 MTND5P34-201ENST00000568888 325 ntBASIC0.62□□□□□ -2.31
RTP3Q9BQQ7 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.261-201ENST00000364631 102 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.344-201ENST00000365381 112 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 AL365222.1-201ENST00000614661 98 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 AC132825.6-201ENST00000638861 357 ntBASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RTP3Q9BQQ7 RNU6-865P-201ENST00000364772 107 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 SNORA7.5-201ENST00000410672 110 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.649-201ENST00000459077 103 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 SNORD33.1-201ENST00000516213 88 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 AP003327.1-201ENST00000529684 127 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 MIR4500-201ENST00000579472 76 ntBASIC0.6□□□□□ -2.31
RTP3Q9BQQ7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 RNY1P8-201ENST00000383970 114 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 RNU6-429P-201ENST00000384582 108 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 RNU6-535P-201ENST00000384722 107 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 MIR548A1-201ENST00000385041 97 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 SNORA62.5-201ENST00000516634 120 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 MIR376B-201ENST00000614515 100 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 U6.95-201ENST00000636931 70 ntBASIC0.59□□□□□ -2.31
RTP3Q9BQQ7 MIR101-2-201ENST00000362195 79 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 RNU4-67P-201ENST00000364569 141 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.362-201ENST00000365518 110 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 RNU6-35P-201ENST00000384530 107 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 RNU6-291P-201ENST00000384720 107 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 MIR548A3-201ENST00000385297 97 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 AC008267.6-201ENST00000441664 139 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 AC007012.1-201ENST00000567192 175 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 uc_338.16-201ENST00000621804 95 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 AP001362.1-201ENST00000625165 124 ntBASIC0.58□□□□□ -2.32
RTP3Q9BQQ7 RNU6-363P-201ENST00000362895 105 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 RNU6-1117P-201ENST00000384525 104 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 MIR34C-201ENST00000384831 77 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 MIR644A-201ENST00000385262 94 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 RNU6-679P-201ENST00000391003 106 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 SNORA31.14-201ENST00000516728 116 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 MIR3678-201ENST00000578455 94 ntBASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.155-201ENST00000363632 101 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNA5SP245-201ENST00000364239 121 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.353-201ENST00000365440 108 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNU4-45P-201ENST00000365469 141 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNU6-22P-201ENST00000384355 107 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.507-201ENST00000384500 99 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNU6-816P-201ENST00000390914 107 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNU6-1268P-201ENST00000391214 107 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNU6-1239P-201ENST00000391310 107 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 HAR1A.1-201ENST00000459583 118 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 RNU6-62P-201ENST00000516526 102 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms