Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
SMOQ99835 RNU6-147P-201ENST00000383983 107 ntBASIC1.14□□□□□ -2.23
SMOQ99835 RNU6-756P-201ENST00000383997 107 ntBASIC1.14□□□□□ -2.23
SMOQ99835 SNORA51.5-201ENST00000384126 131 ntBASIC1.14□□□□□ -2.23
SMOQ99835 MIR100-201ENST00000385259 80 ntBASIC1.14□□□□□ -2.23
SMOQ99835 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
SMOQ99835 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.14□□□□□ -2.23
SMOQ99835 AL031737.1-201ENST00000450125 223 ntBASIC1.14□□□□□ -2.23
SMOQ99835 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.14□□□□□ -2.23
SMOQ99835 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SMOQ99835 MIR1-1-201ENST00000362147 71 ntBASIC1.13□□□□□ -2.23
SMOQ99835 Y_RNA.119-201ENST00000363301 96 ntBASIC1.13□□□□□ -2.23
SMOQ99835 Y_RNA.377-201ENST00000365644 108 ntBASIC1.13□□□□□ -2.23
SMOQ99835 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
SMOQ99835 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
SMOQ99835 MIR590-201ENST00000385008 97 ntBASIC1.13□□□□□ -2.23
SMOQ99835 RNU6-531P-201ENST00000516694 104 ntBASIC1.13□□□□□ -2.23
SMOQ99835 RNU7-156P-201ENST00000517214 74 ntBASIC1.13□□□□□ -2.23
SMOQ99835 MIR4804-201ENST00000581683 73 ntBASIC1.13□□□□□ -2.23
SMOQ99835 AL442128.1-201ENST00000615151 90 ntBASIC1.13□□□□□ -2.23
SMOQ99835 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.13□□□□□ -2.23
SMOQ99835 MIR8066-201ENST00000617280 78 ntBASIC1.13□□□□□ -2.23
SMOQ99835 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.13□□□□□ -2.23
SMOQ99835 Y_RNA.13-201ENST00000362403 112 ntBASIC1.12□□□□□ -2.23
SMOQ99835 RNU6-766P-201ENST00000362478 107 ntBASIC1.12□□□□□ -2.23
SMOQ99835 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
SMOQ99835 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
SMOQ99835 RNU6-904P-201ENST00000516206 101 ntBASIC1.12□□□□□ -2.23
SMOQ99835 RNU6-977P-201ENST00000516411 103 ntBASIC1.12□□□□□ -2.23
SMOQ99835 AC090897.1-201ENST00000580909 226 ntBASIC1.12□□□□□ -2.23
SMOQ99835 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
SMOQ99835 Y_RNA.42-201ENST00000362660 108 ntBASIC1.11□□□□□ -2.23
SMOQ99835 Y_RNA.78-201ENST00000362970 110 ntBASIC1.11□□□□□ -2.23
SMOQ99835 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
SMOQ99835 SNORD89-201ENST00000390981 114 ntBASIC1.11□□□□□ -2.23
SMOQ99835 MIR942-201ENST00000401111 86 ntBASIC1.11□□□□□ -2.23
SMOQ99835 MIR938-201ENST00000401216 83 ntBASIC1.11□□□□□ -2.23
SMOQ99835 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
SMOQ99835 RNU6-537P-201ENST00000517277 103 ntBASIC1.11□□□□□ -2.23
SMOQ99835 DEFB131E-201ENST00000532329 154 ntBASIC1.11□□□□□ -2.23
SMOQ99835 MIR4500-201ENST00000579472 76 ntBASIC1.11□□□□□ -2.23
SMOQ99835 MIR151B-201ENST00000584249 96 ntBASIC1.11□□□□□ -2.23
SMOQ99835 AC008608.1-201ENST00000603910 127 ntBASIC1.11□□□□□ -2.23
SMOQ99835 MIR6082-201ENST00000613604 109 ntBASIC1.11□□□□□ -2.23
SMOQ99835 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
SMOQ99835 MIR200A-201ENST00000384875 90 ntBASIC1.1□□□□□ -2.23
SMOQ99835 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SMOQ99835 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
SMOQ99835 RNU7-56P-201ENST00000458744 62 ntBASIC1.1□□□□□ -2.23
SMOQ99835 RNU7-102P-201ENST00000458948 62 ntBASIC1.1□□□□□ -2.23
SMOQ99835 RNU6-109P-201ENST00000516364 107 ntBASIC1.1□□□□□ -2.23
SMOQ99835 RNU6-184P-201ENST00000516514 107 ntBASIC1.1□□□□□ -2.23
SMOQ99835 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
SMOQ99835 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
SMOQ99835 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.23
SMOQ99835 Y_RNA.178-201ENST00000363832 102 ntBASIC1.09□□□□□ -2.23
SMOQ99835 SNORD38.1-201ENST00000363863 68 ntBASIC1.09□□□□□ -2.23
SMOQ99835 RNU4-36P-201ENST00000364294 144 ntBASIC1.09□□□□□ -2.23
SMOQ99835 RNU6-364P-201ENST00000384387 107 ntBASIC1.09□□□□□ -2.23
SMOQ99835 MIR6788-201ENST00000618842 66 ntBASIC1.09□□□□□ -2.23
SMOQ99835 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
SMOQ99835 AC091304.10-201ENST00000641554 121 ntBASIC1.09□□□□□ -2.23
SMOQ99835 HSBP1P2-201ENST00000299671 229 ntBASIC1.08□□□□□ -2.24
SMOQ99835 RNU4-58P-201ENST00000363192 141 ntBASIC1.08□□□□□ -2.24
SMOQ99835 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
SMOQ99835 RNU6-1335P-201ENST00000365426 107 ntBASIC1.08□□□□□ -2.24
SMOQ99835 RNU6-1113P-201ENST00000384348 107 ntBASIC1.08□□□□□ -2.24
SMOQ99835 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
SMOQ99835 Y_RNA.601-201ENST00000410500 113 ntBASIC1.08□□□□□ -2.24
SMOQ99835 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
SMOQ99835 AC013244.2-201ENST00000603396 103 ntBASIC1.08□□□□□ -2.24
SMOQ99835 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
SMOQ99835 MIR548G-201ENST00000408442 89 ntBASIC1.07□□□□□ -2.24
SMOQ99835 BX276092.1-201ENST00000427368 251 ntBASIC1.07□□□□□ -2.24
SMOQ99835 U7.7-201ENST00000459276 60 ntBASIC1.07□□□□□ -2.24
SMOQ99835 Y_RNA.659-201ENST00000515994 113 ntBASIC1.07□□□□□ -2.24
SMOQ99835 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.07□□□□□ -2.24
SMOQ99835 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SMOQ99835 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
SMOQ99835 RNY1P4-201ENST00000384595 115 ntBASIC1.06□□□□□ -2.24
SMOQ99835 RNU1-119P-201ENST00000391122 165 ntBASIC1.06□□□□□ -2.24
SMOQ99835 SCARNA23-201ENST00000516060 130 ntBASIC1.06□□□□□ -2.24
SMOQ99835 RNU6-795P-201ENST00000516323 103 ntBASIC1.06□□□□□ -2.24
SMOQ99835 RNU6-765P-201ENST00000516916 99 ntBASIC1.06□□□□□ -2.24
SMOQ99835 MIR548Z-201ENST00000584743 97 ntBASIC1.06□□□□□ -2.24
SMOQ99835 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
SMOQ99835 AC096720.1-201ENST00000604441 183 ntBASIC1.06□□□□□ -2.24
SMOQ99835 AC012531.4-201ENST00000616509 177 ntBASIC1.06□□□□□ -2.24
SMOQ99835 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SMOQ99835 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SMOQ99835 Y_RNA.10-201ENST00000362371 110 ntBASIC1.05□□□□□ -2.24
SMOQ99835 RNU6-1163P-201ENST00000364516 107 ntBASIC1.05□□□□□ -2.24
SMOQ99835 SNORD38.2-201ENST00000384470 69 ntBASIC1.05□□□□□ -2.24
SMOQ99835 MIR520H-201ENST00000385126 88 ntBASIC1.05□□□□□ -2.24
SMOQ99835 SPINT5P-201ENST00000448174 155 ntBASIC1.05□□□□□ -2.24
SMOQ99835 MTND5P40-201ENST00000559945 246 ntBASIC1.05□□□□□ -2.24
SMOQ99835 RNU6-90P-201ENST00000606352 106 ntBASIC1.05□□□□□ -2.24
SMOQ99835 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.05□□□□□ -2.24
SMOQ99835 RNU6-170P-201ENST00000362832 104 ntBASIC1.04□□□□□ -2.24
SMOQ99835 SNORD45B-201ENST00000364617 72 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms