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Protein–RNA interactions for Protein: Q99829
CPNE1, Copine-1, human
Predictions only
Length
537 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CPNE1
Q99829
RNU6ATAC4P-201
ENST00000387446
126 nt
BASIC
0.15
□□□□□ -2.39
CPNE1
Q99829
SNORA62.5-201
ENST00000516634
120 nt
BASIC
0.15
□□□□□ -2.39
CPNE1
Q99829
HOTAIR_3.1-201
ENST00000611352
97 nt
BASIC
0.15
□□□□□ -2.39
CPNE1
Q99829
MIR6755-201
ENST00000619993
66 nt
BASIC
0.15
□□□□□ -2.39
CPNE1
Q99829
SNORA9.1-201
ENST00000362412
131 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
RNU6-865P-201
ENST00000364772
107 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.328-201
ENST00000365208
113 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.423-201
ENST00000384057
113 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
RNU6-616P-201
ENST00000384353
107 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
AP001328.1-201
ENST00000528550
176 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
MIR548X2-201
ENST00000579776
100 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
AP001340.1-201
ENST00000624405
217 nt
BASIC
0.14
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.127-201
ENST00000363386
109 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
RNU6-647P-201
ENST00000364243
107 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.270-201
ENST00000364693
104 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
SNORD115-35-201
ENST00000365122
82 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
RNU6-716P-201
ENST00000365621
103 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
MIR548L-201
ENST00000408303
86 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
MIR3144-201
ENST00000579460
79 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
MIR4514-201
ENST00000581410
57 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
MIR6779-201
ENST00000617283
64 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
FTX_2.1-201
ENST00000618816
94 nt
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
KIF20B-201
ENST00000260753
6306 nt
APPRIS P3
TSL 1 (best)
BASIC
0.13
□□□□□ -2.39
CPNE1
Q99829
MIR330-201
ENST00000362196
94 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
RNU6-187P-201
ENST00000384139
106 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
RNU6-804P-201
ENST00000384286
107 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
RNA5SP299-201
ENST00000391203
116 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
MIR548I2-201
ENST00000408348
149 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
RNU7-6P-201
ENST00000516845
62 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
MIR3163-201
ENST00000581592
73 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
MIR8087-201
ENST00000612745
78 nt
BASIC
0.12
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.8-201
ENST00000362353
102 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.114-201
ENST00000363265
113 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
RNU6-726P-201
ENST00000364680
107 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.400-201
ENST00000383963
111 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
MIR759-201
ENST00000390224
91 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
RNU6-1307P-201
ENST00000391012
103 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
RNU7-161P-201
ENST00000517289
62 nt
BASIC
0.11
□□□□□ -2.39
CPNE1
Q99829
SNORA42.1-201
ENST00000363515
137 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.398-201
ENST00000383952
99 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
Y_RNA.420-201
ENST00000384043
110 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
MIR1295A-201
ENST00000408463
79 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
RNU6ATAC41P-201
ENST00000408600
126 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
AC097635.1-201
ENST00000450678
155 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
RNU7-104P-201
ENST00000459398
79 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
TRAJ51-201
ENST00000504127
63 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
RN7SKP19-201
ENST00000516016
252 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
IGKV1-22-201
ENST00000524313
326 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
AC023932.2-201
ENST00000603176
175 nt
BASIC
0.1
□□□□□ -2.39
CPNE1
Q99829
SNORD115-19-201
ENST00000363098
82 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
SNORD115-18-201
ENST00000363293
82 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
RNA5SP403-201
ENST00000363598
108 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.213-201
ENST00000364178
111 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
RNU4-67P-201
ENST00000364569
141 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
SNORD115-17-201
ENST00000364612
82 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
SNORA2A-201
ENST00000383885
135 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
RNU6-886P-201
ENST00000384319
105 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
MIR599-201
ENST00000385069
95 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
MIR760-201
ENST00000390220
80 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
RNA5SP136-201
ENST00000410906
107 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
BX276092.1-201
ENST00000427368
251 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
AC103879.1-201
ENST00000503093
255 nt
TSL 2
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
MIR376B-201
ENST00000614515
100 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
AC087741.2-201
ENST00000619415
172 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
AC067863.3-201
ENST00000624172
122 nt
BASIC
0.09
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.150-201
ENST00000363562
102 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.198-201
ENST00000364013
98 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.215-201
ENST00000364204
112 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.362-201
ENST00000365518
110 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
MIR1197-201
ENST00000408818
88 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
RNA5SP330-201
ENST00000517096
96 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
U7.2-201
ENST00000607576
63 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
AC021753.1-201
ENST00000635724
168 nt
BASIC
0.08
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.258-201
ENST00000364613
105 nt
BASIC
0.07
□□□□□ -2.4
CPNE1
Q99829
RNA5SP128-201
ENST00000365305
116 nt
BASIC
0.07
□□□□□ -2.4
CPNE1
Q99829
MIR519A1-201
ENST00000385257
85 nt
BASIC
0.07
□□□□□ -2.4
CPNE1
Q99829
RNU7-129P-201
ENST00000516128
62 nt
BASIC
0.07
□□□□□ -2.4
CPNE1
Q99829
MIR4752-201
ENST00000579672
72 nt
BASIC
0.07
□□□□□ -2.4
CPNE1
Q99829
AL162376.1-201
ENST00000624117
175 nt
BASIC
0.07
□□□□□ -2.4
CPNE1
Q99829
RNU6-170P-201
ENST00000362832
104 nt
BASIC
0.06
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.280-201
ENST00000364765
112 nt
BASIC
0.06
□□□□□ -2.4
CPNE1
Q99829
RNU6-571P-201
ENST00000384128
107 nt
BASIC
0.06
□□□□□ -2.4
CPNE1
Q99829
MIR569-201
ENST00000385228
96 nt
BASIC
0.06
□□□□□ -2.4
CPNE1
Q99829
MT-TI-201
ENST00000387365
69 nt
BASIC
0.06
□□□□□ -2.4
CPNE1
Q99829
RNA5SP214-201
ENST00000363378
118 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.221-201
ENST00000364248
96 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.360-201
ENST00000365512
102 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
SNORD41.1-201
ENST00000391000
69 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
RNA5SP63-201
ENST00000391225
112 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
MIR1263-201
ENST00000408324
86 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
AC108059.2-201
ENST00000434626
151 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
AL158147.1-201
ENST00000443970
75 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
RNU6-521P-201
ENST00000516663
105 nt
BASIC
0.05
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.115-201
ENST00000363272
98 nt
BASIC
0.04
□□□□□ -2.4
CPNE1
Q99829
Y_RNA.294-201
ENST00000364916
102 nt
BASIC
0.04
□□□□□ -2.4
CPNE1
Q99829
SNORD38.2-201
ENST00000384470
69 nt
BASIC
0.04
□□□□□ -2.4
CPNE1
Q99829
MIR34C-201
ENST00000384831
77 nt
BASIC
0.04
□□□□□ -2.4
CPNE1
Q99829
SNORD63B-201
ENST00000411005
70 nt
BASIC
0.04
□□□□□ -2.4
CPNE1
Q99829
RPL39P34-201
ENST00000477141
156 nt
BASIC
0.04
□□□□□ -2.4
CPNE1
Q99829
RNU1-29P-201
ENST00000606574
126 nt
BASIC
0.04
□□□□□ -2.4
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