Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RN7SL660P-201ENST00000614852 299 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 AP001362.1-201ENST00000625165 124 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 AL162726.3-218ENST00000636401 95 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 RNU1-141P-201ENST00000364623 158 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 RNU6-811P-201ENST00000384069 107 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 MIR604-201ENST00000384880 94 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 Z95118.1-201ENST00000421372 247 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 MTND4LP11-201ENST00000422184 280 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 RNU7-74P-201ENST00000459104 62 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 RNU6-758P-201ENST00000516292 89 ntBASIC-0.66□□□□□ -2.52
RPRD1AQ96P16 RNU6-524P-201ENST00000384270 107 ntBASIC-0.67□□□□□ -2.52
RPRD1AQ96P16 RNU6-768P-201ENST00000384683 107 ntBASIC-0.67□□□□□ -2.52
RPRD1AQ96P16 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
RPRD1AQ96P16 MIR4788-201ENST00000639104 80 ntBASIC-0.67□□□□□ -2.52
RPRD1AQ96P16 MIR655-201ENST00000362159 97 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 RNU6-170P-201ENST00000362832 104 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 U8.6-201ENST00000364939 135 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 MIR4473-201ENST00000583731 91 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 MIR4263-201ENST00000584745 83 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 uc_338.36-201ENST00000622331 158 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 U6.106-201ENST00000636360 105 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 MIR6086-201ENST00000638065 55 ntBASIC-0.68□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.69□□□□□ -2.52
RPRD1AQ96P16 SNORD77B-201ENST00000391112 67 ntBASIC-0.69□□□□□ -2.52
RPRD1AQ96P16 RNA5SP451-201ENST00000410588 110 ntBASIC-0.69□□□□□ -2.52
RPRD1AQ96P16 RNU7-2P-201ENST00000516096 62 ntBASIC-0.69□□□□□ -2.52
RPRD1AQ96P16 AC009779.6-201ENST00000603972 165 ntBASIC-0.69□□□□□ -2.52
RPRD1AQ96P16 FTX_2.1-201ENST00000618816 94 ntBASIC-0.69□□□□□ -2.52
RPRD1AQ96P16 SNORD114-11-201ENST00000363738 75 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 RNA5SP205-201ENST00000364653 136 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 RNU6-818P-201ENST00000364837 108 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 RNU2-38P-201ENST00000410856 79 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 RNU7-188P-201ENST00000517063 64 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 MIR548AG2-201ENST00000581228 64 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 MIR376B-201ENST00000614515 100 ntBASIC-0.7□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 MTATP6P21-201ENST00000440681 189 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 RNU7-106P-201ENST00000459514 67 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 MIR3149-201ENST00000584629 83 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 AC108676.2-201ENST00000605225 163 ntBASIC-0.71□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.72□□□□□ -2.52
RPRD1AQ96P16 MIR519E-201ENST00000385075 84 ntBASIC-0.72□□□□□ -2.52
RPRD1AQ96P16 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.72□□□□□ -2.52
RPRD1AQ96P16 RPS29P8-201ENST00000445109 171 ntBASIC-0.72□□□□□ -2.52
RPRD1AQ96P16 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.72□□□□□ -2.52
RPRD1AQ96P16 RNU6-571P-201ENST00000384128 107 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 RNU6-616P-201ENST00000384353 107 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 MIR548H3-201ENST00000408771 118 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 RNA5SP25-201ENST00000410815 110 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 RNU6-284P-201ENST00000411105 106 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 MTND2P23-201ENST00000422990 651 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 AC093423.1-201ENST00000440817 142 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 AC069503.3-201ENST00000618674 145 ntBASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.73□□□□□ -2.53
RPRD1AQ96P16 RNA5SP368-201ENST00000364298 116 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 SNORD115-35-201ENST00000365122 82 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 MIR181B2-201ENST00000385004 89 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 AL603914.1-201ENST00000401964 204 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 MIR548F4-201ENST00000408515 105 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 RNA5SP476-201ENST00000516613 103 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 YWHAEP2-201ENST00000580066 112 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 AL590491.3-201ENST00000610731 82 ntBASIC-0.74□□□□□ -2.53
RPRD1AQ96P16 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 MIR617-201ENST00000385030 97 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 SNORA75.5-201ENST00000391291 81 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 SNORD75.1-201ENST00000408373 60 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 SNORD127-201ENST00000458892 86 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 AC114755.3-201ENST00000481111 251 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 AC044792.1-201ENST00000593294 196 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 uc_338.10-201ENST00000621872 182 ntBASIC-0.75□□□□□ -2.53
RPRD1AQ96P16 RNU6-508P-201ENST00000363231 103 ntBASIC-0.76□□□□□ -2.53
RPRD1AQ96P16 SNORD27-201ENST00000363981 72 ntBASIC-0.76□□□□□ -2.53
RPRD1AQ96P16 RNU6-480P-201ENST00000384332 107 ntBASIC-0.76□□□□□ -2.53
RPRD1AQ96P16 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.76□□□□□ -2.53
RPRD1AQ96P16 AL117351.2-201ENST00000513571 157 ntBASIC-0.76□□□□□ -2.53
RPRD1AQ96P16 RNU6-850P-201ENST00000516934 103 ntBASIC-0.76□□□□□ -2.53
RPRD1AQ96P16 SNORD95.1-201ENST00000364099 68 ntBASIC-0.77□□□□□ -2.53
RPRD1AQ96P16 RNU6-867P-201ENST00000364956 107 ntBASIC-0.77□□□□□ -2.53
RPRD1AQ96P16 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.77□□□□□ -2.53
RPRD1AQ96P16 MIR548AE1-201ENST00000583292 70 ntBASIC-0.77□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms