Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MIR3613-201ENST00000579844 87 ntBASIC0.75□□□□□ -2.29
FOXN4Q96NZ1 MIR4676-201ENST00000583078 72 ntBASIC0.75□□□□□ -2.29
FOXN4Q96NZ1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.75□□□□□ -2.29
FOXN4Q96NZ1 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-755P-201ENST00000364400 103 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 SNORA51.5-201ENST00000384126 131 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 MIR598-201ENST00000384868 97 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 MIR125B2-201ENST00000385128 89 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 SNORD89-201ENST00000390981 114 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-447P-201ENST00000410293 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-355P-201ENST00000410427 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-791P-201ENST00000410467 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-705P-201ENST00000410601 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-860P-201ENST00000410860 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-785P-201ENST00000411324 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 AL031737.1-201ENST00000450125 223 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNA5SP436-201ENST00000516020 115 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-977P-201ENST00000516411 103 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 RNU6-531P-201ENST00000516694 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 DEFB131E-201ENST00000532329 154 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 U6.90-201ENST00000614007 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 U6.70-201ENST00000620287 104 ntBASIC0.74□□□□□ -2.29
FOXN4Q96NZ1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1313P-201ENST00000362622 102 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNU6-147P-201ENST00000383983 107 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNU6-756P-201ENST00000383997 107 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1201P-201ENST00000384227 107 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 MIR590-201ENST00000385008 97 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 MIR942-201ENST00000401111 86 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNU7-156P-201ENST00000517214 74 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 MIR4694-201ENST00000578534 80 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 MIR4500-201ENST00000579472 76 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 AC090897.1-201ENST00000580909 226 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
FOXN4Q96NZ1 RNY3P2-201ENST00000362918 102 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNU6-832P-201ENST00000363319 107 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNU6-153P-201ENST00000364422 104 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNY1P2-201ENST00000364820 117 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNU6-364P-201ENST00000384387 107 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 MIR520F-201ENST00000384824 87 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 MIR200A-201ENST00000384875 90 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNU6-109P-201ENST00000516364 107 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNU6-184P-201ENST00000516514 107 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 RNU6-1018P-201ENST00000516577 106 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 MIR4804-201ENST00000581683 73 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 AL442128.1-201ENST00000615151 90 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 AP001362.1-201ENST00000625165 124 ntBASIC0.72□□□□□ -2.29
FOXN4Q96NZ1 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 MIR938-201ENST00000401216 83 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 MIR1827-201ENST00000408549 66 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 BX276092.1-201ENST00000427368 251 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 RNU7-102P-201ENST00000458948 62 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 RNU6-1006P-201ENST00000516998 103 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 MTND5P40-201ENST00000559945 246 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 AC008608.1-201ENST00000603910 127 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 MIR8066-201ENST00000617280 78 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 AC091304.10-201ENST00000641554 121 ntBASIC0.71□□□□□ -2.3
FOXN4Q96NZ1 RNU6-766P-201ENST00000362478 107 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU4-36P-201ENST00000364294 144 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 SPINT5P-201ENST00000448174 155 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU7-56P-201ENST00000458744 62 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.659-201ENST00000515994 113 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU6-904P-201ENST00000516206 101 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU6-795P-201ENST00000516323 103 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 MIR6082-201ENST00000613604 109 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.7□□□□□ -2.3
FOXN4Q96NZ1 RNU4-58P-201ENST00000363192 141 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 SNORD38.1-201ENST00000363863 68 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 FABP5P4-201ENST00000437203 171 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 MIR548Z-201ENST00000584743 97 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 SNORD92-201ENST00000585078 85 ntBASIC0.69□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.377-201ENST00000365644 108 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 RNU6-1113P-201ENST00000384348 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 263.4 ms