Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-429P-201ENST00000384582 108 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 SNORA75.5-201ENST00000391291 81 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 MIR548L-201ENST00000408303 86 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 RNA5SP163-201ENST00000410304 99 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 RNU7-48P-201ENST00000458875 63 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 AC107027.2-201ENST00000512197 115 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 MIR548AG2-201ENST00000581228 64 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 MIR34C-201ENST00000384831 77 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 SNORD63B-201ENST00000411005 70 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 RNU7-106P-201ENST00000459514 67 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 NAMPTP3-201ENST00000569273 224 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 MIR548H5-201ENST00000580314 60 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 MIR3920-201ENST00000581751 86 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 AC011603.4-201ENST00000611325 277 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.12□□□□□ -2.43
ZNF560Q96MR9 RNU4-84P-201ENST00000364200 139 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 MTND3P2-201ENST00000438452 342 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 AC097635.1-201ENST00000450678 155 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 AC074198.2-201ENST00000508153 258 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 RNU7-2P-201ENST00000516096 62 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 AL670379.3-201ENST00000605040 251 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 MIR6844-201ENST00000637122 62 ntBASIC-0.13□□□□□ -2.43
ZNF560Q96MR9 SNORA20.1-201ENST00000364790 130 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 RNU6-735P-201ENST00000410612 107 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 RNU7-197P-201ENST00000458836 62 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 RNU7-165P-201ENST00000458864 60 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 RNU7-121P-201ENST00000516604 62 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 AC087741.2-201ENST00000619415 172 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 AP001362.1-201ENST00000625165 124 ntBASIC-0.14□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU6-312P-201ENST00000364629 107 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU6-524P-201ENST00000384270 107 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 MIR635-201ENST00000384830 98 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU6-239P-201ENST00000390990 99 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU6-460P-201ENST00000391158 108 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 U4.1-201ENST00000620349 87 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 MIR6514-201ENST00000622549 70 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 MIR1295B-201ENST00000636144 60 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 MIR1255B1-201ENST00000636325 63 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 AC099654.10-201ENST00000640395 161 ntBASIC-0.15□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 RNU6-170P-201ENST00000362832 104 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 RNU6-682P-201ENST00000363843 106 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 SNORD115-35-201ENST00000365122 82 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 MIR519A1-201ENST00000385257 85 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 MIR876-201ENST00000401147 81 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 SNORD110-201ENST00000408189 75 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 AC006210.1-201ENST00000424882 111 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 AL161932.1-201ENST00000437408 146 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 AL353813.1-201ENST00000440700 253 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 RNU6-180P-201ENST00000516697 61 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 RNU6-861P-201ENST00000516745 106 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 MIR3646-201ENST00000578301 84 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 MIR5706-201ENST00000579841 80 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 AL137067.1-201ENST00000615933 120 ntBASIC-0.16□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 RNU4-11P-201ENST00000365287 132 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 RNU6V-201ENST00000384105 107 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 MIR516A2-201ENST00000384888 90 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 MIR516A1-201ENST00000385033 90 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 MIR1302-3-201ENST00000408128 138 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 RNU6-850P-201ENST00000516934 103 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 SNORA81.3-201ENST00000517283 198 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 MTND5P40-201ENST00000559945 246 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 MIR548AE1-201ENST00000583292 70 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 MIR4473-201ENST00000583731 91 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms