Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 SNORD41.1-201ENST00000391000 69 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 RNU6-269P-201ENST00000391077 97 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 RNU7-164P-201ENST00000459221 62 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 AC107027.2-201ENST00000512197 115 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 MIR548AD-201ENST00000584780 82 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 AC073869.9-201ENST00000641610 120 ntBASIC-0.21□□□□□ -2.44
ITCHQ96J02 RNU6-161P-201ENST00000363051 106 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 RNU6-449P-201ENST00000383914 107 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 RNU6-918P-201ENST00000391219 106 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 SNORA75.5-201ENST00000391291 81 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 RNU4-69P-201ENST00000410677 143 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.22□□□□□ -2.44
ITCHQ96J02 SNORD49B-201ENST00000365172 72 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 MIR1302-3-201ENST00000408128 138 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 RNA5SP451-201ENST00000410588 110 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 MTCYBP9-201ENST00000431021 303 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 RPS29P8-201ENST00000445109 171 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 RNU7-165P-201ENST00000458864 60 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 RNU7-48P-201ENST00000458875 63 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 TRAJ51-201ENST00000504127 63 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 RNU7-123P-201ENST00000515911 60 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
ITCHQ96J02 MIR4500-201ENST00000579472 76 ntBASIC-0.23□□□□□ -2.45
ITCHQ96J02 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 RNU6-312P-201ENST00000364629 107 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 MIR206-201ENST00000384872 86 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 MIR599-201ENST00000385069 95 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 RNA5SP163-201ENST00000410304 99 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 AC097635.1-201ENST00000450678 155 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 MIR3128-201ENST00000581957 66 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 uc_338.28-201ENST00000612082 187 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 MIR6844-201ENST00000637122 62 ntBASIC-0.24□□□□□ -2.45
ITCHQ96J02 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.25□□□□□ -2.45
ITCHQ96J02 RNU6-46P-201ENST00000383860 107 ntBASIC-0.25□□□□□ -2.45
ITCHQ96J02 SNORD77B-201ENST00000391112 67 ntBASIC-0.25□□□□□ -2.45
ITCHQ96J02 RNU2-60P-201ENST00000517290 128 ntBASIC-0.25□□□□□ -2.45
ITCHQ96J02 MIR4677-201ENST00000584153 80 ntBASIC-0.25□□□□□ -2.45
ITCHQ96J02 SNORD114-12-201ENST00000365400 75 ntBASIC-0.26□□□□□ -2.45
ITCHQ96J02 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.26□□□□□ -2.45
ITCHQ96J02 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.26□□□□□ -2.45
ITCHQ96J02 MIR3646-201ENST00000578301 84 ntBASIC-0.26□□□□□ -2.45
ITCHQ96J02 AC062037.2-201ENST00000610137 73 ntBASIC-0.26□□□□□ -2.45
ITCHQ96J02 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 MIR568-201ENST00000385036 95 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 MIR548I2-201ENST00000408348 149 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 RNU6-588P-201ENST00000410281 105 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 AC006210.1-201ENST00000424882 111 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 BX276092.1-201ENST00000427368 251 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 RNU6-111P-201ENST00000517179 105 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 AP001362.1-201ENST00000625165 124 ntBASIC-0.27□□□□□ -2.45
ITCHQ96J02 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 SNORA20.1-201ENST00000364790 130 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 SNORD18B-201ENST00000365659 72 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 RNU6-47P-201ENST00000383866 107 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 MIR224-201ENST00000384889 81 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 SNORD4A-201ENST00000459174 72 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 RNA5SP67-201ENST00000516422 131 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 RNU6-180P-201ENST00000516697 61 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 MIR548AX-201ENST00000580117 73 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 MIR3925-201ENST00000584674 77 ntBASIC-0.28□□□□□ -2.45
ITCHQ96J02 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 RNU6-509P-201ENST00000363519 107 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 MIR519A1-201ENST00000385257 85 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 SNORD110-201ENST00000408189 75 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 RNU7-2P-201ENST00000516096 62 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 MIR8064-201ENST00000612863 90 ntBASIC-0.29□□□□□ -2.46
ITCHQ96J02 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 RNU6-865P-201ENST00000364772 107 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 RNA5SP266-201ENST00000410273 108 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 NAMPTP3-201ENST00000569273 224 ntBASIC-0.3□□□□□ -2.46
ITCHQ96J02 RNU6-508P-201ENST00000363231 103 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 RNA5SP484-201ENST00000458857 111 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 snoU13.11-201ENST00000459219 104 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 AC009779.6-201ENST00000603972 165 ntBASIC-0.31□□□□□ -2.46
ITCHQ96J02 MIR6514-201ENST00000622549 70 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 238.8 ms