| NGLY1 | Q96IV0 | LRRCC1-202 | ENST00000414626 | 4493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR96-201 | ENST00000362288 | 78 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | Y_RNA.178-201 | ENST00000363832 | 102 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | SNORD1A-201 | ENST00000364968 | 72 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU4-83P-201 | ENST00000410863 | 133 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU6-947P-201 | ENST00000516264 | 106 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU6-1223P-201 | ENST00000517124 | 104 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | ZNRD1-AS1_1.6-201 | ENST00000610339 | 68 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | CYP19A1-220 | ENST00000613097 | 123 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | ST7-AS2_1.1-201 | ENST00000622900 | 72 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR103A2-201 | ENST00000362154 | 78 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | Y_RNA.119-201 | ENST00000363301 | 96 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR30A-201 | ENST00000385092 | 71 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | AC087499.7-201 | ENST00000441958 | 109 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | snoU13.9-201 | ENST00000458927 | 103 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU6-850P-201 | ENST00000516934 | 103 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR4500-201 | ENST00000579472 | 76 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | SNORD33-201 | ENST00000362761 | 85 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | Y_RNA.57-201 | ENST00000362806 | 113 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR519C-201 | ENST00000385053 | 87 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | HMGN2P38-201 | ENST00000423806 | 265 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU6-857P-201 | ENST00000515893 | 110 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | SNORA44.1-201 | ENST00000517031 | 108 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU6-654P-201 | ENST00000364373 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | RNU6-524P-201 | ENST00000384270 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR18B-201 | ENST00000454574 | 71 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | AC090255.1-201 | ENST00000495779 | 349 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | AC079140.2-201 | ENST00000506193 | 142 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR514B-201 | ENST00000516774 | 80 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR6078-201 | ENST00000611069 | 100 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| NGLY1 | Q96IV0 | MIR517C-201 | ENST00000385103 | 95 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | TRAJ61-201 | ENST00000390479 | 60 nt | APPRIS P1 BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-519P-201 | ENST00000410590 | 108 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | SNORD4B-201 | ENST00000459083 | 72 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-165P-201 | ENST00000517170 | 99 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR3664-201 | ENST00000579074 | 99 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | Y_RNA.244-201 | ENST00000364484 | 109 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU1-93P-201 | ENST00000364704 | 169 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | Y_RNA.316-201 | ENST00000365118 | 111 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNA5SP338-201 | ENST00000410495 | 85 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | ATP6V0E1P3-201 | ENST00000420036 | 246 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AL353795.2-201 | ENST00000431804 | 425 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AC093729.1-201 | ENST00000513074 | 128 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | CEP162-201 | ENST00000257766 | 5063 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-24P-201 | ENST00000384440 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-1065P-201 | ENST00000384513 | 106 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | Y_RNA.588-201 | ENST00000391254 | 102 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | BX276092.1-201 | ENST00000427368 | 251 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | Y_RNA.648-201 | ENST00000459455 | 110 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AC024382.1-201 | ENST00000520224 | 292 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AL078612.1-201 | ENST00000533009 | 150 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR4448-201 | ENST00000584360 | 86 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | C9orf84-205 | ENST00000394779 | 5060 nt | APPRIS ALT2 TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-652P-201 | ENST00000365488 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6ATAC20P-201 | ENST00000408436 | 127 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNA5SP95-201 | ENST00000410319 | 137 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | SNORA31.24-201 | ENST00000517232 | 57 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AC019176.1-201 | ENST00000518519 | 225 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AC140658.3-201 | ENST00000567603 | 271 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR4491-201 | ENST00000581087 | 68 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR1323-201 | ENST00000408090 | 73 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-1054P-201 | ENST00000411293 | 104 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU7-85P-201 | ENST00000458851 | 63 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR151B-201 | ENST00000584249 | 96 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | FAM19A1-204 | ENST00000617084 | 159 nt | TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | HFM1-201 | ENST00000370425 | 4931 nt | APPRIS P1 TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AC008163.1-205 | ENST00000413944 | 4649 nt | TSL 1 (best) BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR520E-201 | ENST00000384867 | 87 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AL512310.8-201 | ENST00000550183 | 120 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | IST1-227 | ENST00000626438 | 126 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | UBE3A-225 | ENST00000636667 | 5726 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | SNORD36A-201 | ENST00000362874 | 73 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU4-58P-201 | ENST00000363192 | 141 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU1-36P-201 | ENST00000365130 | 165 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR1236-201 | ENST00000408340 | 102 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RPS29P1-201 | ENST00000465274 | 159 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | RNU6-1194P-201 | ENST00000516208 | 104 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | AC019288.1-201 | ENST00000557918 | 224 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR3937-201 | ENST00000580135 | 106 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | MIR6788-201 | ENST00000618842 | 66 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NGLY1 | Q96IV0 | Y_RNA.94-201 | ENST00000363068 | 106 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NGLY1 | Q96IV0 | RNU6-531P-201 | ENST00000516694 | 104 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NGLY1 | Q96IV0 | SNORA25.16-201 | ENST00000516741 | 121 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NGLY1 | Q96IV0 | SNORD115-37-201 | ENST00000363768 | 82 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NGLY1 | Q96IV0 | TRAJ47-201 | ENST00000390490 | 57 nt | APPRIS P1 BASIC | 2.07 | □□□□□ -2.08 | | |
| NGLY1 | Q96IV0 | RNU6-1254P-201 | ENST00000391266 | 104 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NGLY1 | Q96IV0 | SNORD93-201 | ENST00000408813 | 74 nt | BASIC | 2.07 | □□□□□ -2.08 | | |