Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 RNU1-141P-201ENST00000364623 158 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 MIR206-201ENST00000384872 86 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 RNU7-48P-201ENST00000458875 63 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 MTND5P40-201ENST00000559945 246 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 AL627230.5-201ENST00000619807 58 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 MIR4788-201ENST00000639104 80 ntBASIC-0.67□□□□□ -2.52
ECHDC3Q96DC8 RNU4-32P-201ENST00000363404 141 ntBASIC-0.68□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.68□□□□□ -2.52
ECHDC3Q96DC8 RNU6-690P-201ENST00000365242 106 ntBASIC-0.68□□□□□ -2.52
ECHDC3Q96DC8 MIR587-201ENST00000384845 96 ntBASIC-0.68□□□□□ -2.52
ECHDC3Q96DC8 AC020661.2-201ENST00000560114 134 ntBASIC-0.68□□□□□ -2.52
ECHDC3Q96DC8 AL590491.3-201ENST00000610731 82 ntBASIC-0.68□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 AL603914.1-201ENST00000401964 204 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 RNU4-69P-201ENST00000410677 143 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 AC093423.1-201ENST00000440817 142 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 RNU7-13P-201ENST00000516413 62 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 MIR3171-201ENST00000584270 74 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 MIR4324-201ENST00000584846 72 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 MIR4436A-201ENST00000585278 85 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 MIR6738-201ENST00000619620 64 ntBASIC-0.69□□□□□ -2.52
ECHDC3Q96DC8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 U8.6-201ENST00000364939 135 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 SNORD63B-201ENST00000411005 70 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 RNU7-195P-201ENST00000458793 62 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 RNU2-4P-201ENST00000606190 192 ntBASIC-0.7□□□□□ -2.52
ECHDC3Q96DC8 RNA5SP331-201ENST00000364986 107 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 RNU6-10P-201ENST00000384036 107 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 MT-TW-201ENST00000387382 68 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 AC114755.3-201ENST00000481111 251 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 AP001362.1-201ENST00000625165 124 ntBASIC-0.71□□□□□ -2.52
ECHDC3Q96DC8 RNU6-170P-201ENST00000362832 104 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 RNY3P16-201ENST00000516338 101 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 MIR548AG2-201ENST00000581228 64 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 AC069503.3-201ENST00000618674 145 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 MIR4320-201ENST00000636981 65 ntBASIC-0.72□□□□□ -2.52
ECHDC3Q96DC8 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.73□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.73□□□□□ -2.53
ECHDC3Q96DC8 MIR181B2-201ENST00000385004 89 ntBASIC-0.73□□□□□ -2.53
ECHDC3Q96DC8 MIR196A1-201ENST00000388006 70 ntBASIC-0.73□□□□□ -2.53
ECHDC3Q96DC8 RNU7-188P-201ENST00000517063 64 ntBASIC-0.73□□□□□ -2.53
ECHDC3Q96DC8 RNU6-275P-201ENST00000364910 107 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 RNY4P28-201ENST00000365281 93 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 RNU6-524P-201ENST00000384270 107 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 RNU6-472P-201ENST00000384299 107 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 MIR519E-201ENST00000385075 84 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 RNU7-123P-201ENST00000515911 60 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 RNU6-240P-201ENST00000516098 97 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 AC138907.4-201ENST00000570107 226 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 AC021443.1-201ENST00000604478 211 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 MIR8062-201ENST00000621515 85 ntBASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.74□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 RNU6-571P-201ENST00000384128 107 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 RNU6-713P-201ENST00000384761 107 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 MIR617-201ENST00000385030 97 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 RNU7-164P-201ENST00000459221 62 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 RNU7-106P-201ENST00000459514 67 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 MTND1P19-201ENST00000511780 315 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 RNU7-2P-201ENST00000516096 62 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 MIR4432-201ENST00000581823 84 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 uc_338.10-201ENST00000621872 182 ntBASIC-0.75□□□□□ -2.53
ECHDC3Q96DC8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 RNU6-480P-201ENST00000384332 107 ntBASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 MIR4308-201ENST00000580634 81 ntBASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 MIR4473-201ENST00000583731 91 ntBASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 MIR3149-201ENST00000584629 83 ntBASIC-0.76□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 SNORD115-44-201ENST00000365391 82 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 SNORA33.2-201ENST00000365413 134 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms