Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNORD89-201ENST00000390981 114 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 RNU6-904P-201ENST00000516206 101 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 RNU6-1194P-201ENST00000516208 104 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 RNU6-765P-201ENST00000516916 99 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 AC090897.1-201ENST00000580909 226 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 AC096720.1-201ENST00000604441 183 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 HSBP1P2-201ENST00000299671 229 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 MIR520F-201ENST00000384824 87 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 RNU7-56P-201ENST00000458744 62 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 RNU7-102P-201ENST00000458948 62 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 RNU6-531P-201ENST00000516694 104 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 RMST_2.1-201ENST00000617263 136 ntBASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ATG4AQ8WYN0 MIR450A1-201ENST00000362262 91 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 RNU6-153P-201ENST00000364422 104 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 Y_RNA.247-201ENST00000364500 92 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 RNU1-119P-201ENST00000391122 165 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 SNORA19.1-201ENST00000410656 129 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 RNA5SP102-201ENST00000516865 106 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 MIR4500-201ENST00000579472 76 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
ATG4AQ8WYN0 RNU6-147P-201ENST00000383983 107 ntBASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 Y_RNA.601-201ENST00000410500 113 ntBASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 MIR3613-201ENST00000579844 87 ntBASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ATG4AQ8WYN0 MIR590-201ENST00000385008 97 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 MIR548G-201ENST00000408442 89 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 RNU6-537P-201ENST00000517277 103 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 AP003327.1-201ENST00000529684 127 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 Y_RNA.818-201ENST00000618813 71 ntBASIC1.01□□□□□ -2.25
ATG4AQ8WYN0 Y_RNA.191-201ENST00000363972 113 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 SNORD45B-201ENST00000364617 72 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 MIR520H-201ENST00000385126 88 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 SNORD105-201ENST00000386910 85 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 SNRPGP12-201ENST00000449481 213 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 Y_RNA.659-201ENST00000515994 113 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 MTND5P40-201ENST00000559945 246 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 AC013244.2-201ENST00000603396 103 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 RNU6-90P-201ENST00000606352 106 ntBASIC1□□□□□ -2.25
ATG4AQ8WYN0 SPINT5P-201ENST00000448174 155 ntBASIC0.99□□□□□ -2.25
ATG4AQ8WYN0 SCARNA23-201ENST00000516060 130 ntBASIC0.99□□□□□ -2.25
ATG4AQ8WYN0 AC025627.3-201ENST00000582078 182 ntBASIC0.99□□□□□ -2.25
ATG4AQ8WYN0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 MIR101-2-201ENST00000362195 79 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 RNU6-32P-201ENST00000383948 107 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 RNU6-571P-201ENST00000384128 107 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 RNU6-13P-201ENST00000384248 107 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 RNU6-12P-201ENST00000384604 107 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 Y_RNA.544-201ENST00000384650 113 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 RNU6-41P-201ENST00000384741 107 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 BX276092.1-201ENST00000427368 251 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 MIR4439-201ENST00000583746 80 ntBASIC0.98□□□□□ -2.25
ATG4AQ8WYN0 AC004941.2-201ENST00000427009 228 ntBASIC0.97□□□□□ -2.25
ATG4AQ8WYN0 RNU6-448P-201ENST00000517052 107 ntBASIC0.97□□□□□ -2.25
ATG4AQ8WYN0 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
ATG4AQ8WYN0 AC091304.10-201ENST00000641554 121 ntBASIC0.97□□□□□ -2.25
ATG4AQ8WYN0 RNU6-170P-201ENST00000362832 104 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 SNORD100-201ENST00000408573 76 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 MTATP6P29-201ENST00000415057 132 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 RNU6-109P-201ENST00000516364 107 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 RNU6-184P-201ENST00000516514 107 ntBASIC0.96□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.56-201ENST00000362798 112 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.107-201ENST00000363190 121 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 RNU6-1163P-201ENST00000364516 107 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.495-201ENST00000384435 112 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.508-201ENST00000384502 114 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 RNU6-795P-201ENST00000516323 103 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 RNU6-850P-201ENST00000516934 103 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 MIR548H5-201ENST00000580314 60 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 RNU7-10P-201ENST00000607194 63 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 AC012531.4-201ENST00000616509 177 ntBASIC0.95□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.93-201ENST00000363066 109 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 SNORD114-22-201ENST00000365423 72 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.466-201ENST00000384294 113 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 RNU6-291P-201ENST00000384720 107 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 MIR518E-201ENST00000385252 88 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 AC109327.2-201ENST00000448339 378 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms