Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 AC023790.1-201ENST00000482174 347 ntBASIC1.99□□□□□ -2.09
DDX54Q8TDD1 RNA5SP102-201ENST00000516865 106 ntBASIC1.99□□□□□ -2.09
DDX54Q8TDD1 MIR3937-201ENST00000580135 106 ntBASIC1.99□□□□□ -2.09
DDX54Q8TDD1 AC006160.2-201ENST00000637708 154 ntBASIC1.99□□□□□ -2.09
DDX54Q8TDD1 AL354695.1-201ENST00000427935 228 ntBASIC1.98□□□□□ -2.09
DDX54Q8TDD1 RNU1-123P-201ENST00000458950 160 ntBASIC1.98□□□□□ -2.09
DDX54Q8TDD1 SNORA25.16-201ENST00000516741 121 ntBASIC1.98□□□□□ -2.09
DDX54Q8TDD1 RNU6-850P-201ENST00000516934 103 ntBASIC1.98□□□□□ -2.09
DDX54Q8TDD1 MIR4452-201ENST00000583004 71 ntBASIC1.98□□□□□ -2.09
DDX54Q8TDD1 MIR3202-2-201ENST00000635980 79 ntBASIC1.98□□□□□ -2.09
DDX54Q8TDD1 RNU6-633P-201ENST00000362612 103 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 RNU6-53P-201ENST00000365367 106 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 RNU6-480P-201ENST00000384332 107 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 MIR30A-201ENST00000385092 71 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 AC015818.7-201ENST00000428754 109 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 AC087499.7-201ENST00000441958 109 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 SNRPGP12-201ENST00000449481 213 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 RNU7-171P-201ENST00000459581 62 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 RPL30P7-201ENST00000479312 323 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 AL353770.2-201ENST00000620024 78 ntBASIC1.97□□□□□ -2.09
DDX54Q8TDD1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
DDX54Q8TDD1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
DDX54Q8TDD1 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
DDX54Q8TDD1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.96□□□□□ -2.1
DDX54Q8TDD1 MT-TN-201ENST00000387400 73 ntBASIC1.96□□□□□ -2.1
DDX54Q8TDD1 MIR3664-201ENST00000579074 99 ntBASIC1.96□□□□□ -2.1
DDX54Q8TDD1 RNU6-524P-201ENST00000384270 107 ntBASIC1.95□□□□□ -2.1
DDX54Q8TDD1 RNU6-531P-201ENST00000516694 104 ntBASIC1.95□□□□□ -2.1
DDX54Q8TDD1 Y_RNA.426-201ENST00000384068 113 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
DDX54Q8TDD1 MIR1304-201ENST00000408243 91 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 SNORD93-201ENST00000408813 74 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 AC048334.1-201ENST00000477975 159 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 MIR4666B-201ENST00000578142 81 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 MIR4491-201ENST00000581087 68 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
DDX54Q8TDD1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
DDX54Q8TDD1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 SNORD114-22-201ENST00000365423 72 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 RNU6-652P-201ENST00000365488 107 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 SNORA72.6-201ENST00000384520 129 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 RNA5SP395-201ENST00000516567 118 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX54Q8TDD1 AL512310.8-201ENST00000550183 120 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 MIR8066-201ENST00000617280 78 ntBASIC1.93□□□□□ -2.1
DDX54Q8TDD1 RNU6-403P-201ENST00000363163 104 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 MT-TF-201ENST00000387314 71 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 RNU6-519P-201ENST00000410590 108 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 SNORD83.1-201ENST00000411362 77 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 AL161932.1-201ENST00000437408 146 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 RNU7-153P-201ENST00000516455 62 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 RNU11-2P-201ENST00000516898 142 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
DDX54Q8TDD1 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
DDX54Q8TDD1 RNU6-580P-201ENST00000365159 107 ntBASIC1.91□□□□□ -2.1
DDX54Q8TDD1 MIR516A2-201ENST00000384888 90 ntBASIC1.91□□□□□ -2.1
DDX54Q8TDD1 MIR516A1-201ENST00000385033 90 ntBASIC1.91□□□□□ -2.1
DDX54Q8TDD1 RPS27P16-201ENST00000425758 201 ntBASIC1.91□□□□□ -2.1
DDX54Q8TDD1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.91□□□□□ -2.1
DDX54Q8TDD1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.91□□□□□ -2.1
DDX54Q8TDD1 AC023934.1-201ENST00000574529 2389 ntBASIC1.9□□□□□ -2.11
DDX54Q8TDD1 MIR377-201ENST00000362145 69 ntBASIC1.9□□□□□ -2.11
DDX54Q8TDD1 RNU1-36P-201ENST00000365130 165 ntBASIC1.9□□□□□ -2.11
DDX54Q8TDD1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.9□□□□□ -2.11
DDX54Q8TDD1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
DDX54Q8TDD1 RNU7-85P-201ENST00000458851 63 ntBASIC1.9□□□□□ -2.11
DDX54Q8TDD1 snoU13.11-201ENST00000459219 104 ntBASIC1.9□□□□□ -2.11
DDX54Q8TDD1 RNU4-32P-201ENST00000363404 141 ntBASIC1.89□□□□□ -2.11
DDX54Q8TDD1 SNORA75.2-201ENST00000391138 150 ntBASIC1.89□□□□□ -2.11
DDX54Q8TDD1 SNORA75.3-201ENST00000391231 150 ntBASIC1.89□□□□□ -2.11
DDX54Q8TDD1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 RNU6-571P-201ENST00000384128 107 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 RNU6-42P-201ENST00000384165 107 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 MIR519C-201ENST00000385053 87 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 SNORD4B-201ENST00000459083 72 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 RNU7-106P-201ENST00000459514 67 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 AL078603.1-201ENST00000603824 313 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 AC008163.1-202ENST00000636004 2889 ntBASIC1.88□□□□□ -2.11
DDX54Q8TDD1 MIR96-201ENST00000362288 78 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 Y_RNA.244-201ENST00000364484 109 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 MIR7-2-201ENST00000384970 110 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
DDX54Q8TDD1 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 RN7SKP88-201ENST00000516847 250 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.87□□□□□ -2.11
DDX54Q8TDD1 AC023827.1-201ENST00000569247 97 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 AC013244.2-201ENST00000603396 103 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 7SK.8-201ENST00000612110 250 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 7SK.11-201ENST00000615477 250 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 7SK.13-201ENST00000622040 250 ntBASIC1.87□□□□□ -2.11
DDX54Q8TDD1 Y_RNA.316-201ENST00000365118 111 ntBASIC1.86□□□□□ -2.11
DDX54Q8TDD1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.86□□□□□ -2.11
DDX54Q8TDD1 MIR18B-201ENST00000454574 71 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms